Gene Syncc9902_0675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0675 
Symbol 
ID3743958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp685267 
End bp686229 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content55% 
IMG OID637770847 
Productputative chaperon-like protein for quinone binding in photosystem II 
Protein accessionYP_376687 
Protein GI78184252 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.240438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGTTC TGGTGGTTGG AGGAACGGGC ACCCTCGGAC GGCAGATTGC TCGTCGAGCC 
TTGGATTCAG GGCATCAGGT TCGTTGCATG GTCCGAACCC CTCGCAAGGC GGCGTTTTTG
CAGGAGTGGG GCTGTGAGCT CACACGTGGT GACCTGTTGG AGCCCGACAG CCTCGATTAC
GCCCTTGACG GTGTTGATGC GGTGATCGAT GCCGCCACCA GTCGCCCTAG TGATCCGCAG
AGCATTTACG AGTCTGATTG GGACGGAAAG CTCAATCTCC TGAAGGCCTG TGATCGCGCC
AATGTGAAGC GATTCGTGTT CCTTTCGTTG CTAGGGGCCC ACCGGTATCG CGATGTGCCG
TTGATGGACA TCAAGGCATG TACTGAGAAT CTGCTGGAGG CTTCGGATTT TGATTACACC
ATCCTCCAAG GCGCAGCTTT TATGCAGGGT GTGATCAGCC AATTCGCAAT CCCAGTGTTG
GAAAGCCAAA CCGTTTGGGT GAGTGGAAGT CCTACGGCGA TTGCTTATAT GAACACCCAG
GACATGGCCC GTTTTGCGGT GGCGGCCCTC GAACGTCCAG AAACGGTGAG GGGAACCTTC
CCTGTTGTGG GCCCTAAACC CTGGAATACA GGGCAACTGG TTCAGCTGTG CGAGCGTTGC
AGCGACAAGA CGGCGCGTGT GTTCCGCGTT CAGCCGATCT TGATCAAGCT GATGCAAGGC
GTTGCTTCAT TTTTCGAACC TGCCGTAAAT GTGGCCGAAC GTCTGGCCTT CGCAGAAGTC
ACCGGTGGTG GTCAGGCCCT CGATGCTCCG ATGAAATCCA GTTATGCCGC GTTCGGCTTG
GATGAAGCCG AGACAACGGA TATGGAGAGT TATATCCGGG AGTACTACGA CACGATTCTC
AAGAAGCTTC GTGAGATGGA GGCGGATCTT GATAAAGACG CCAAGAAAAA ACTTCCCTTC
TAG
 
Protein sequence
MQVLVVGGTG TLGRQIARRA LDSGHQVRCM VRTPRKAAFL QEWGCELTRG DLLEPDSLDY 
ALDGVDAVID AATSRPSDPQ SIYESDWDGK LNLLKACDRA NVKRFVFLSL LGAHRYRDVP
LMDIKACTEN LLEASDFDYT ILQGAAFMQG VISQFAIPVL ESQTVWVSGS PTAIAYMNTQ
DMARFAVAAL ERPETVRGTF PVVGPKPWNT GQLVQLCERC SDKTARVFRV QPILIKLMQG
VASFFEPAVN VAERLAFAEV TGGGQALDAP MKSSYAAFGL DEAETTDMES YIREYYDTIL
KKLREMEADL DKDAKKKLPF