Gene Syncc9902_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0670 
Symbol 
ID3743626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp681685 
End bp682365 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content55% 
IMG OID637770842 
Productpeptidyl-prolyl cis-trans isomerase, cyclophilin type 
Protein accessionYP_376682 
Protein GI78184247 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.454239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTCTC CTTTTCGTCG TGTTGTGTGG TCGTTGCTGC TTCTCTTCCC CTTGATGGTG 
AGTTGCAGTC CTTCACCGCA GGCATCGCCA ACACCATCCT GTGCCGACGC AAATGTTCCT
TGTCTTCAGG GCACAACCCA GGTTCAGATG AGCACCAATC GCGGCGAGAT CACGATCGAG
GTTGATGGTG ATGCTGCGCC GATCACAGCT GGCAATTTTG TGGATTTGGT GCGTCGTGGC
ACCTACGACG GAACGATGTT TCATCGCGTG GTGCGCGAAC CCGTTCCCTT CGTTGTTCAA
GGGGGAGATC CCAAGTCAAC GGATCGTTCC GTTCCCTTAA ATCAATTGGG CACCGGAAGT
TTTGTTGATC CACAAACCGG TCAATCCCGA ATGATTCCTC TGGAGATTGG TTTCCGTGGA
GAAGAGAATC CCCGCTACAG CCGGGAAATT ACCAATCCCA GTCAGCTGGA TTCCCTCAGG
CTGAACCATG AACGTGGCTC GGTGGCGATG GCACGGTCTC AGGCCCCAGA CTCCGCCAGC
GCTCAGTTTT ATATCGCCTT AAAGCCTTTA CCAGAACTGG ATGGCCGCTA TGCCGTTTTC
GGGAGGGTGA TTGAGGGCAT GGACGTTGTT GATGAGATTC GCCAGGGGGA TCGGATCACC
AAAGCCAGCC TTGGCGATTG A
 
Protein sequence
MRSPFRRVVW SLLLLFPLMV SCSPSPQASP TPSCADANVP CLQGTTQVQM STNRGEITIE 
VDGDAAPITA GNFVDLVRRG TYDGTMFHRV VREPVPFVVQ GGDPKSTDRS VPLNQLGTGS
FVDPQTGQSR MIPLEIGFRG EENPRYSREI TNPSQLDSLR LNHERGSVAM ARSQAPDSAS
AQFYIALKPL PELDGRYAVF GRVIEGMDVV DEIRQGDRIT KASLGD