| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0633 |
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| Symbol | |
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| ID | 3742636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 642133 |
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| End bp | 645618 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637770805 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_376645 |
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| Protein GI | 78184210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAAGG CTCCAAAGAA AAATCAATTC AAGCTATCAA TCCCTTCAGG ACGACAACTC
CTACGCACAA CGGCACGCAG ACTCAGTAGA GAAGGTATCA TTCCGGGATT TATTCGCCAG
CAACTGAAAC GCAGAATCAG TACAGATTCA AAAGCACCAG ACAATCGACG TCAAAAAATC
ACCCCTGAAC TTCAAGCCTA TATTCGAAAA ATTGACAACA ACCAAATCAG CAAGACACAA
TATCGTGACA TACGTGAGCT GGCGCATTAC GCTTACATAT TTGACGTAAA TTTCTATAAA
AAACAATTAC CCGACACAGA ATTAAAAGAG GTCAACAACT TAGGCAATTG TCTAGAACAC
TACTGCACAA AGGGATGGAA AGCAGGCATT GACCCAAGCC CTCTATTCGA CACCAACAAC
TACTTCAGCA AATACCCAGA TATCAAAGAA AGCGAGATTA ATCCAATGGT GCACTTCCTT
AAGTTTGGCA TCCAAGAGAG TCGATATTCG ATGGACGACA TCCATTTCAT GAGAAAGACT
GCAGGAATCA AGAAAGCCAC ATACAGCAAT GATGGCAAGC TAATTTCGAG CATTGGACAG
AAAAAATTTG GCGTATTTTT ACATATATTC TATCCAGAAC TAGCTCCAAT AATTGCAGAC
TACATTCGAA AAATTCCCGT AAAAATTGAT ATCCATATTT CAACAACTCA TGACGCAATT
AGTGGACTAA CTGAAATCTT TAAGGGATTA GAAAATTCTC TGAATGTGCA GGTCAAATCC
TTTCCCAACA TTGGACGAGA CGTTGCGCCA TTCATCGTTG GATTTCGGGA AGAGATACCC
AAATACGATT ACATTCTCAA ACTTCATTCC AAGAAAAGTC CTCACAGCAA CGCCTTAAGT
GGATGGTTTG AACACTGCCT GGACAATCTT ATCGGCAGCA TTGATGTGTT CTACACAAAT
ATTCAGGAGC TCAATAAAGA GGATATATCC ATAGTTTATC CAGTCGAAAA TTATGCCTTA
AGCCTAGGAA TTAAACACGA TTCCTGCTGG GGCCATGAAG ACGGAAATTA CAACAAAGCA
AAAACCCTTC TCAAAAAATT AGGTCTTGAA CAAATTAATC GCAACAGCGA ATTCCTATTC
CCCACTGGCA ATATGTTTTG GTGTAAACCA GATATTTTAA AGCCGATCCT AGACTGGGAT
CTAAAATTCG AAGATTTCGA CAATGAAGGA GGACAAATCG ATGGGACACT CGCCCATAGT
ATTGAACGAT TAATTGGTCT ATGCTGTACA GAATATTTCC ACAAAAAAAT CATTACGAGC
TACTGCGGCT ATGCAGAATC CAAACAACAT CAATCTGATA AGAAAGTCAT TGAAGGACGA
AATAAATTAC AAATTGATGG ATTTGAAAAA GTAATTCAGT TTAAAGAGAA GACCCTGAAT
CCTTCCTGGA AGAACCACAA CAATGCATCA CCAAACCAAC TCCAAATTCA CTGGGTAATT
CCAAACTTTA CGCGTGGCTT AGGCGGACAT ATGACGATTT TTAGAACCAT CGATTATTTA
GAGCGATGCG GCCATGACTG CACTATCTGG GTTCACTCTG AAATCAAAGG GGACAAACCA
AGTCGCCTAA GCTCACTTCA CAAGAGGGTC ATTGATCAGA GCTTTATCAA ACTAAAGACT
GACCAAGTTT ACATGCTTGG CAACACCAAT GACGATTTAG AAAAAGTGAG TGGTGATGTT
GTGATTGCTA CTGATCGAAT GAGTACATAT CCAGTACTTG GCATGCGAAA GTTCGCAAAG
AGATTTTATT TCGTTCAAGA CTATGAGCCA TTTTTCTTCG CAAAAGGAAC ATCAACGGTC
CTAACAGAAC AAACTTATCG ATCAAACCAC AAATTTGCTT GCATTTGTGC CAGCCCTTGG
CTTAAGAATA TGATGATCGA GCAGGGAAAT TCTGCGATTT CATTTCCATT GGCTGTCGAC
ACTGATACAT ATTATCAATC CAAAAAGATT ATAAGATCTA AAAATACCAT CGCTTTTTAT
GTTCGCCGCA GCACACCACG TCGTTTATAT CAGCTTGGAC TTTTGGCTTT AAGAGCACTC
TTTGATCTAG GAGATAGCTT TGAAATCATC ACCTTTGGTG AAAACTATTT ACCAGATCTA
GGGATTCCAG TAAAAATTAC ACATGCAGGA ATTCTGAATT CCGAGTCCTT ATCAAAGCTC
TATCAAAGAT CCACGGCCGG TCTTGTTTTA TCAGGAACAA ATTACTCCCT AGTTCCGAAC
GAAATGATGG CTTGTGGTTT ACCTGTAGTT GATATTGATG CACCCCATAC ACGGCTCTCA
TATACATCTA ATACAGCGAT ACTTGCCCAA CCCAACCCGG AAGCATTAGC AGCAGCATTG
AGTCAACTTC TCAATGATGA TGTTCTGCGC GAACAGGCAA CGATCGCAGG ACTAACAGCA
ACAAAAAGTC TTACATGGGA TCGATCTAAC ACCATTGTCG AAAGTTTTAT CCGTACTCAA
TTTGAAGCTG CACTGCCACC AGATCAGAAT CAAAACTTAC CTCAAGCAGA TCCAACCGTC
ACCATTGTCA TCCCTGTCTA CAACGGGGGC GATCAACTAA TCAGCGTCGT GGAGACTTGT
CTTCAACAAG ATCTTGATGC TGAATTTGAA ATATTAATCA TTGATAGTTC CTCAACAGAT
GGATGTATCA ACCATTTACC AAAAGACGAA CGAATCCGAA TTCATCGGAT TTCAAAAAGT
GACTTCGGCC ATGGGCGCAC TCGCAATCTT GGCGTGAGCC TGGCCCGAGG AGAATTCGTT
GCATTCATTA CGCAAGATGC AATTCCTGCG AACAGAATGT GGTTGATGAA CCTCATTGAA
CCACTTCAAA CGGACCGAAA GATTGCTGGT GTTTTTGGAT GCCACATTGC CCATGAGGGG
CACAACCCAT TAACTTCATA TGATCTGGAT CAACATTTCA ATCGGTGGAT TTTCCGAAGT
CATCGAAAAC CAATTGAATT AGAGGAAAGT CGAAAAAAAC CTAATGCACC GATCAGTAAT
CACGAACGTT TTTATTCTGA TAACAATTCA TGCTTACGCA AAAATGCCTG GGAACAAGTA
CCAATACCAG AGGTTATTTA TGGAGAAGAC CAGCTCTGGG CTATCGATAT ATTGCGCCAC
GGATTTAAAA AGGCTTACGC TTCAACTGCC ATCGTAAGAC ACTCTCACGA ATACAATTTT
CGAGAAACAC TCATCAGAGC CAATACAGAA TGGCATTTTT ATCAACAACA TCTCGGAGAA
TATCTCCCCT CCACAAAGAA AGATGTGAGG GCAATGATTG AGTCGAGCTG TACGAATGAC
AAAAAGGCTC AGGAACTATT TCCAGAGATT ACGGAAGAGC AACTAATTGC CCGTCGAAAG
CTTCATTTTG CTCGCGCCTG TGGTTACTAC TTTGCCGGGA AAGGCATCGG GTCCATCCGA
CCCTAA
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| Protein sequence | MAKAPKKNQF KLSIPSGRQL LRTTARRLSR EGIIPGFIRQ QLKRRISTDS KAPDNRRQKI
TPELQAYIRK IDNNQISKTQ YRDIRELAHY AYIFDVNFYK KQLPDTELKE VNNLGNCLEH
YCTKGWKAGI DPSPLFDTNN YFSKYPDIKE SEINPMVHFL KFGIQESRYS MDDIHFMRKT
AGIKKATYSN DGKLISSIGQ KKFGVFLHIF YPELAPIIAD YIRKIPVKID IHISTTHDAI
SGLTEIFKGL ENSLNVQVKS FPNIGRDVAP FIVGFREEIP KYDYILKLHS KKSPHSNALS
GWFEHCLDNL IGSIDVFYTN IQELNKEDIS IVYPVENYAL SLGIKHDSCW GHEDGNYNKA
KTLLKKLGLE QINRNSEFLF PTGNMFWCKP DILKPILDWD LKFEDFDNEG GQIDGTLAHS
IERLIGLCCT EYFHKKIITS YCGYAESKQH QSDKKVIEGR NKLQIDGFEK VIQFKEKTLN
PSWKNHNNAS PNQLQIHWVI PNFTRGLGGH MTIFRTIDYL ERCGHDCTIW VHSEIKGDKP
SRLSSLHKRV IDQSFIKLKT DQVYMLGNTN DDLEKVSGDV VIATDRMSTY PVLGMRKFAK
RFYFVQDYEP FFFAKGTSTV LTEQTYRSNH KFACICASPW LKNMMIEQGN SAISFPLAVD
TDTYYQSKKI IRSKNTIAFY VRRSTPRRLY QLGLLALRAL FDLGDSFEII TFGENYLPDL
GIPVKITHAG ILNSESLSKL YQRSTAGLVL SGTNYSLVPN EMMACGLPVV DIDAPHTRLS
YTSNTAILAQ PNPEALAAAL SQLLNDDVLR EQATIAGLTA TKSLTWDRSN TIVESFIRTQ
FEAALPPDQN QNLPQADPTV TIVIPVYNGG DQLISVVETC LQQDLDAEFE ILIIDSSSTD
GCINHLPKDE RIRIHRISKS DFGHGRTRNL GVSLARGEFV AFITQDAIPA NRMWLMNLIE
PLQTDRKIAG VFGCHIAHEG HNPLTSYDLD QHFNRWIFRS HRKPIELEES RKKPNAPISN
HERFYSDNNS CLRKNAWEQV PIPEVIYGED QLWAIDILRH GFKKAYASTA IVRHSHEYNF
RETLIRANTE WHFYQQHLGE YLPSTKKDVR AMIESSCTND KKAQELFPEI TEEQLIARRK
LHFARACGYY FAGKGIGSIR P
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