Gene Syncc9902_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0575 
Symbol 
ID3742902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp580108 
End bp580857 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content58% 
IMG OID637770746 
Producthypothetical protein 
Protein accessionYP_376587 
Protein GI78184152 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATGC CGCGCTCGCT TAAACGTTTG GGCTCAAGCC TTTTGATCGG CGGCCAAGCC 
GTTACAGCAA CAATGCGCGG GCGGATCAAC ACAGTGGATC TTTCCGATCA GTTGATGGAA
GCCGGCCCAG GCAGCTTGCT GATCGTCTTC ATCATCTCGG TGGCTGCAGG CTCGGTTTTC
AACATTCAAG TGGCCGCAGA GCTCACCCGA CAAGGGGCTG GATCCACGGT GGGCGGCATC
CTCGCGATCG GACTCGCCCG GGAAATCGCA CCCCTACTCA CCGCCTGCTT GCTGGCCGGG
AAAGTCGCCA CTGCCTACGC AGCGCAGCTG GGCACCATGA AAGTGACCGA ACAAATTGAT
GCGATCACAA TGCTGCGCAC CGACCCAGTG GAATACCTGG TGGTGCCAAG GCTGATCGCC
CTTGTGGTGA TGGCACCTCT GCAGTGCTTT TTCTTTTTCA TCGTGGCGGT TTGGTCGGGA
CAGATCACAA GCACCGCGCT CTACAACATT CCACCCTCAG TGTTCTGGAC GTCCGTGCGC
ACCTGGATGC ATCCAGAGGA TCTGCCCTTC ATGCTTGTGA AGGCTGTGGT GTTTGGCTTG
ATCATCGCCA CCATTTCCTG CGGGTGGGGC CTCACCACCA AGGGTGGCCC GAAGGAAGTG
GGCACCAGTA CCACAGGTGC CGTGGTGATG ATCCTAATTT TGGTTTGCAT CATGGACGTG
GTGTTAACCC AAGTGCTGTT CGGCGCATGA
 
Protein sequence
MRMPRSLKRL GSSLLIGGQA VTATMRGRIN TVDLSDQLME AGPGSLLIVF IISVAAGSVF 
NIQVAAELTR QGAGSTVGGI LAIGLAREIA PLLTACLLAG KVATAYAAQL GTMKVTEQID
AITMLRTDPV EYLVVPRLIA LVVMAPLQCF FFFIVAVWSG QITSTALYNI PPSVFWTSVR
TWMHPEDLPF MLVKAVVFGL IIATISCGWG LTTKGGPKEV GTSTTGAVVM ILILVCIMDV
VLTQVLFGA