Gene Syncc9902_0465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0465 
Symbol 
ID3743846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp482887 
End bp484158 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content60% 
IMG OID637770636 
Productputative 3-oxoacyl-(acyl-carrier-protein) synthase I 
Protein accessionYP_376477 
Protein GI78184042 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0359598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAA CACCTGAACG GTCGGCCATT GTTGGCTGGG GTTCAGTCAC CCCACTCGGC 
TCAAATCCGC ACACCACCTG GCAGGGAGCG CTTGGCGGAC GTTCTGGGAT TCAAGCGCTG
CACGACCCCT GGAGCAGCGA CCTGGCCACA CGCATTGCTG GACGTGTGGA GGACGCAGCA
TTTACACCAC TAGAGCCCAT CCTTCGCAGA CGGGCTGACC GCTGTGCACA ACTTGCTTTA
TTGGCGGCAA GACAGGCTTG GGGCATGGCC TTAGAACGAG CACCAGGGCT GGATCCCGAT
CGGGTTGCCG TCGTGATCGG CACTGGGATT GGTGGGCTCT CCACCATGCA TGAACAGCAC
ATGCAACTCT CCGAAGGGGG GCCATCACGG GTGAATCCGC TCACGGTGCC GATGCTGATT
CCCGACGCTC CTGCGGGGCA AGTTGCCATC GACTTAGGGC TTCATGGCGG TGCCCATGCA
CCCGTATCGG CCTGTGCATC TGGGGCTGAA GCGATGATGC TGGCCCAAAT GTTGCTCAAC
GACGACCGTG CCGATTTGGT GCTCGCGGGG GGAACTGAAG CGCCAGTGAA CAGGCTTGGG
CTCGTGGGAT TTTCCGCCAT GCGCGCGCTC TCATCCCGCA ATGACGCACC AGAGCAGGCC
TCTCGCCCGT ACAGCACAGA CCGTGACGGC TTTGTGTTGT CGGAAGGCGC AGGAGTGCTG
GCGATGATGC GCGATTGCGA TGTTCCTACC GGTGCAGCCC TCGGCTGGCA GCTCGCGAGT
GGCAGCAGCA GCGATGGGCA TCACATTGTG GCTCCAGAGC CGCAGGGAAT CCAGGCCAGT
CGGGCGATTG ACGATGCCCT CCGACGGGCG GACGTCGATC CTGCAGATCT CTGCGCCGTT
CAAGCCCATG CCACGGGCAC AAATCTCGGT GATCTCGCCG AAGCCAGAGC CTTGCGGCGC
AGTTTGGGGC CAGTGGCAGA TTTCCTACCG GTATACGCAC CGAAAGGGCA GCTGGGTCAC
CTCCTAGGAG CCGCCGGATC CGTCGAAGCG ATCTTGGGAT TCCAGGCTTT GAGAGAAGGA
ATCTTGCCGC AAAGCATCAA CGCCGATCCT CTTGATCCAG GCGTGGACTT AGCGGTTACT
ACATCAGGAC CAGTGAAGCT TCCAGATCAT CCATCAGAGC GTTTCATGCT CAAAAATGCC
TTTGGTTTTG GCGGTCACAA CATCAGCCTG ATTCTTGCTG TGCCCTGTAG TACTGCTGCA
CGGCTCGACT AA
 
Protein sequence
MPKTPERSAI VGWGSVTPLG SNPHTTWQGA LGGRSGIQAL HDPWSSDLAT RIAGRVEDAA 
FTPLEPILRR RADRCAQLAL LAARQAWGMA LERAPGLDPD RVAVVIGTGI GGLSTMHEQH
MQLSEGGPSR VNPLTVPMLI PDAPAGQVAI DLGLHGGAHA PVSACASGAE AMMLAQMLLN
DDRADLVLAG GTEAPVNRLG LVGFSAMRAL SSRNDAPEQA SRPYSTDRDG FVLSEGAGVL
AMMRDCDVPT GAALGWQLAS GSSSDGHHIV APEPQGIQAS RAIDDALRRA DVDPADLCAV
QAHATGTNLG DLAEARALRR SLGPVADFLP VYAPKGQLGH LLGAAGSVEA ILGFQALREG
ILPQSINADP LDPGVDLAVT TSGPVKLPDH PSERFMLKNA FGFGGHNISL ILAVPCSTAA
RLD