| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0430 |
|---|
| Symbol | |
|---|
| ID | 3742729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 444980 |
|---|
| End bp | 445855 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637770602 |
|---|
| Product | site-specific recombinase XerD-like |
|---|
| Protein accession | YP_376444 |
|---|
| Protein GI | 78184009 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00678047 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTTTGA GGCGATTTCT TGGTCAATGC TCCAGAACGA ACAGTCAGGA GACACGCGAC
GGCTACATGC GCGATTTGCG GCACCTAACA AGGTGGCGTG ACAGGCACTA TCCCGATCTT
TTGATTCGAG AGCTGGACCC ACCAATGGTT CAAAACTGGA TTGATGATCT GCGCGGCCAG
GTTGATGCTG GCGAAATCAA ACCCAGGACT TTCAACCGCA GGCTGTCTGT TGTGTCAGCA
CTGTTCCGAT GGGCTTCTGA GCCATCAAGG TCTGGTGTGA CTGGAATTGG GCGAAACCCT
GTTCCAGGCA AATCTCATCT TGTTGGCGGC AAGGAAGGCA AAGCCATGTC GGAAGACGAT
TTATCCAAGC TGTTGGGCGT TGTGGCTTCC AGCCGTGATC GATCAGCCAG GAACAACCGT
GATTTTGTTT TGATCCGTGG CTCCTATTTG CTTGGCGCAA GGGTTAGCGA GGTTGCACGG
CTTCAGTGGT GTGACGTTGA ACCGCTAGCT GACGGCGGAC AAATTCATTT GCTGGGTAAG
GGCAGCAAGG CCAGGACAGT TCGGGTTAGT GCCGACACGC TCCAACTCTT TGAGTCATTG
GGACGTGCAG GCGAATCTGA TTATTTGTTC CCGTCATCAA GAACCAAATC GCATCTGACG
CGTCAGGCGA TCAATTACAC GATGCGGAAA TGGGGGGAAA AGGCTGGAGT TGATGTTCAC
CCGCACAAGC TCCGCCATTC ACATGCCACA CACGCCATAA GGCGCGGAAC CAATGTTTTC
TGCTTGCAGC ACACATTGGG GCATAGCTCC ACTGACACCA CCAGTGGCTA CGTCAAACAA
AACCCAGACG ATTCATCTTC TTTGGCGTTG GGGTAA
|
|---|
| Protein sequence | MLLRRFLGQC SRTNSQETRD GYMRDLRHLT RWRDRHYPDL LIRELDPPMV QNWIDDLRGQ
VDAGEIKPRT FNRRLSVVSA LFRWASEPSR SGVTGIGRNP VPGKSHLVGG KEGKAMSEDD
LSKLLGVVAS SRDRSARNNR DFVLIRGSYL LGARVSEVAR LQWCDVEPLA DGGQIHLLGK
GSKARTVRVS ADTLQLFESL GRAGESDYLF PSSRTKSHLT RQAINYTMRK WGEKAGVDVH
PHKLRHSHAT HAIRRGTNVF CLQHTLGHSS TDTTSGYVKQ NPDDSSSLAL G
|
|---|
| |