| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0301 |
|---|
| Symbol | |
|---|
| ID | 3743536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | - |
|---|
| Start bp | 312233 |
|---|
| End bp | 313429 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637770468 |
|---|
| Product | poly A polymerase family protein |
|---|
| Protein accession | YP_376317 |
|---|
| Protein GI | 78183883 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATG CTGCTCCCGA CGAGCAGGCA CGGCTCCTGC TGAAACAGCT CGATCCAGAC
GCCTGGCCGA TCTCCATCGA CCAGCTGCCT GAAGGCACAG CTTTGGTGGG CGGGGCTGTA
CGGGATGCAT TGCTTGGTCG ACACAACCCA CATCCCGATC TTGATCTCGT GGTGCGCAGC
GATGCTCTAC GACACTCCGC ACGTCTTGCG AAGATTTTCG GGGGCAAACA TGTGGTGCTG
GATGAGCAGA GAGACATCGC CCGTCTCGTT CTCAACGGAT GGACCATCGA TGTAGCCCGA
CAGGAGGGTG ATGGCCTTGA AGACGACCTG TGGAGGCGTG ATTACAGCAT TAATGCCATT
GCACTCCCAC TCCAGCCGAT GGCCTCGCTA TGCGACCCAA CGGGAGGCTT AGGGGATCTC
AAGCAGGGAC GCTTGCGCGC TGTCCGCGAA CAGAACCTGA TCGACGACCC ACTACGCCTC
CTCCGCGGCC TGCGGTTTCT GGCGGAGATC CCCCTAGTGC TCGATGCCCA AACGGGGGAG
TGGATCCAGC GTCATCACCA AGCTTTAGGG CAGTCCGCCC CTGAACGCAT CCTGGCTGAA
CTGCAACGGC TCGTAAAAGG CCCCCATGCC GACCAAGCCC TTCACCTCCT GGAGCAGTGG
CCATTGCTCC AACCATGGGC CACAACATCA CAAACAGTCG CTTCGTACGA CACAACGCTG
TTGAACGCCG AAGAGGCGAC TAATGCCCTT CCCCTGGCTC GCTTAACAAA GCTCATCAGC
GACGACGGCC TCAAGCGGCT CAAGGCCAGC AAAATCCTGC AACAGCGCTG TGCACGACTG
CGCCACTGGG GTCTGCAAGC GAAACAGCAA CCGGAGGCCT TACCGGAACA GGAACGACTC
CAACTGCATC TGGAGCTCGA AGGCGATCTT GCCGCTTTGA TCCTTGATCT ACCGAAGGAG
CTGCAGCCGC AATGGCTGAA ACGCTGGCGT GATCCAAGCG ATCCGTTGTT TCACCCCACC
ATGCCCCTTG ATGGAGGCAG CCTTCAAAAG GAACTGGGGT TGTCGGCTGG ACCAACCATG
GGGAAAGTGC TCGCCCAACT TCGCCTTGAG CGAGCCTTTG GACGGATCCA GACTCGCGAC
GAAGCACTCA AAACGGCCCA TCGCCTATGC GCCGAAATCG AGGCGGTCTG TGATTAA
|
|---|
| Protein sequence | MADAAPDEQA RLLLKQLDPD AWPISIDQLP EGTALVGGAV RDALLGRHNP HPDLDLVVRS
DALRHSARLA KIFGGKHVVL DEQRDIARLV LNGWTIDVAR QEGDGLEDDL WRRDYSINAI
ALPLQPMASL CDPTGGLGDL KQGRLRAVRE QNLIDDPLRL LRGLRFLAEI PLVLDAQTGE
WIQRHHQALG QSAPERILAE LQRLVKGPHA DQALHLLEQW PLLQPWATTS QTVASYDTTL
LNAEEATNAL PLARLTKLIS DDGLKRLKAS KILQQRCARL RHWGLQAKQQ PEALPEQERL
QLHLELEGDL AALILDLPKE LQPQWLKRWR DPSDPLFHPT MPLDGGSLQK ELGLSAGPTM
GKVLAQLRLE RAFGRIQTRD EALKTAHRLC AEIEAVCD
|
|---|
| |