Gene Syncc9902_0294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0294 
Symbol 
ID3742791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp306480 
End bp307211 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID637770461 
Producthypothetical protein 
Protein accessionYP_376310 
Protein GI78183876 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCA CCCACCACAG CAGCTTGGTC ATGCTGGTGT TGCTGGTGCT CTTCGCGGTG 
ATTCACAGCG GAGGTGCAGC CCTACGCGTT CGAGCTGAAG CCGTCATCGG AGCACGAGCG
TGGCGTTTGA TCTTTGCTGC CCTCAGCATT CCTTCAGCGG TGGTGGTGAT TGGCTACTTT
CTGGCCCACC GCTACGACGG TCTCCGGCTT TGGAACCTGC AAGGCGTTCC TGGGATGGTG
CCAATGGTGT GGGTTGGCAC CGCGATCAGT TTTCTTTTTC TCTACCCAGC CACTTACAAC
TTGCTGGAAA TCCCTGCAGT GTTGAAGCCT CAGGTGCGCC TTTATGCCAC AGGAATTATC
AGGATCAGCC GCCATCCACA GGCAGTTGGG CAAATTCTGT GGTGCTTCAC CCATGCTCTG
TGGATAGGGA GCAGTTTCAT GCTGGTGACC TGCGCAGGAC TTATTGCCCA CCACCTTTTC
GCTGTTTGGC ATGGGGATCG CCGCCTGAAG TTGCGCTTTG GAGATGCCTT CGATGAACTC
AAAAACTCCA CCTCATCGGT GCCCTTTGTC GCCGTACTCG ATGGTCGCCA GAACCTGGAT
TGGCGCGAGT TTGTCCGTCC GGCACAACTG GGAATTGCCA TCGCAGTAGG CGTGTTTTGG
TGGGCCCATC GCTTTATTCC CCAAGCCGGC GAGTTGGTGC GCAACTCCGC ACTCGAGTCC
CTGTTCAGCT GA
 
Protein sequence
MATTHHSSLV MLVLLVLFAV IHSGGAALRV RAEAVIGARA WRLIFAALSI PSAVVVIGYF 
LAHRYDGLRL WNLQGVPGMV PMVWVGTAIS FLFLYPATYN LLEIPAVLKP QVRLYATGII
RISRHPQAVG QILWCFTHAL WIGSSFMLVT CAGLIAHHLF AVWHGDRRLK LRFGDAFDEL
KNSTSSVPFV AVLDGRQNLD WREFVRPAQL GIAIAVGVFW WAHRFIPQAG ELVRNSALES
LFS