| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0288 |
|---|
| Symbol | |
|---|
| ID | 3742785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 299183 |
|---|
| End bp | 300076 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637770455 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_376304 |
|---|
| Protein GI | 78183870 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAGACGG CGCTCCAGTG CGCAATTGAG GCCGGCAAGC AGGCACTCAC GGCAGAGGTC
ATGCCGCCAA GAGGTGCTGA TCCTGCTCAC ATGCTTGCTA TGGCGGCTCA TTTGCAGGGG
CGCGTGCACG CTTTGAACGT CACGGATGGC AGCCGTGCTG TCATGCGAAT GAGCAGTGTG
GCCGCCTGCA AACTCCTGAT CGAGGCAGGT GCTGAACCTG TGTTGCAGTT GGCCTGCCGT
GATCGCAATC GGATTGCTTT GCAGGCGGAT TTGCTCGGTG CCCATGCTTT GGGGATTCGC
AATCTCCTTT GTCTTACGGG CGATCCCGTT CGCAGTGGGG ATCAGCCTTC GGTGCGGCCG
GTAAACGAGT TGGAGTCTGT GAAATTGCTG CAGCAAGTGG AGGCTTTGAA CCGAGGTGAG
GATCCCGTGA AGGGCAGTCT TCCTGATGGT GCTACTGCTC TTTTTCCAGG GTGTGCAGCC
GACCCTCACT CGCGGAGTTG GAGTGGTTTA CAACGTCGAT TGCAGCGGAA GGCTGGAGCC
GGTGCTCGAT TCGTGCAAAC CCAAATGGTG ATGGACCCGC AGGTGTTGGA CCGGTTTCAG
CGGGAGCTGG CGGGGCCGCT TCAGCTTCCA GTTTTGGCAG GGGTGTTTTT GTTGAAATCG
GCCAAAAATG CCCTGTTTAT TAACCGTGTG GTGCCAGGGG CATGCATTCC CGAGCACTTG
ATCGAGCGTC TTGAAGGCGC ATCAAATCCC GCGATGGAAG GCGTTTCCAT TGCCGCTGAG
CAGGTGCGGC AATACCTCGG CATTGTTCAG GGTGTGCATC TCATGGCGAT TAAGGCAGAG
GAGCGAATCC CCTTAATCCT TGATCAAGCG AACATCAGTT CACCGACGAC ATGA
|
|---|
| Protein sequence | MKTALQCAIE AGKQALTAEV MPPRGADPAH MLAMAAHLQG RVHALNVTDG SRAVMRMSSV
AACKLLIEAG AEPVLQLACR DRNRIALQAD LLGAHALGIR NLLCLTGDPV RSGDQPSVRP
VNELESVKLL QQVEALNRGE DPVKGSLPDG ATALFPGCAA DPHSRSWSGL QRRLQRKAGA
GARFVQTQMV MDPQVLDRFQ RELAGPLQLP VLAGVFLLKS AKNALFINRV VPGACIPEHL
IERLEGASNP AMEGVSIAAE QVRQYLGIVQ GVHLMAIKAE ERIPLILDQA NISSPTT
|
|---|
| |