Gene Syncc9902_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0287 
Symbol 
ID3742784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp298826 
End bp299104 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content49% 
IMG OID637770454 
ProductLuxR family transcriptional regulator 
Protein accessionYP_376303 
Protein GI78183869 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATCCG TCGATACAAC TGATCCCTTG GACATTTCTC TGTCTGCCAG GGAGATCGAG 
ATCATTCAGT TGGTGGCAGA GGGTCTCACC AATCAAGAAA TCGCCGATCG TTTGACCATC
AGCAAACGAA CCGTGGACAA CCATGTGAGC AATGTGTTCA CCAAAACAGG TTCAAAAAAC
CGGGTGGCTT TGCTGAATTG GGCTATGGAC AACGGAAAGA TTTGTCGTGA CGGTTTTAAC
TGCTGCGCTC TTCCAGATGC CGATCCCCAC GAACCTTGA
 
Protein sequence
MSSVDTTDPL DISLSAREIE IIQLVAEGLT NQEIADRLTI SKRTVDNHVS NVFTKTGSKN 
RVALLNWAMD NGKICRDGFN CCALPDADPH EP