| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0272 |
|---|
| Symbol | purH |
|---|
| ID | 3742317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9902 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007513 |
|---|
| Strand | + |
|---|
| Start bp | 284925 |
|---|
| End bp | 286487 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637770439 |
|---|
| Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| Protein accession | YP_376288 |
|---|
| Protein GI | 78183854 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
|---|
| TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCTG TCGCTCTGCT GAGTGTGTCC GACAAATCTG GGCTTTTGCC GTTGGCCGAG
GCTCTGCATC GAATCCATGG CTATCAATTG CTCTCCAGTG GTGGCACCGC CAAGGTGCTT
GAGCAGGCTG GCCTTCCGGT AACCCGTGTT TCCGAGTACA CCGGGGCCCC TGAGATTTTG
GGTGGCCGCG TCAAAACGCT GCATCCCCGT GTTCACGGTG GAATTTTGGC CAAGCGTGGT
GATGCGGCCC ATCAGAACGA CCTTGAACAA CAGAACATCA ACTTCATTGA TGTGGTGGTC
GTGAATCTGT ATCCCTTCCG GGAAACAGTT GCCAAGGCTG ATGTCACTTG GGATCAAGCG
ATTGAAAACA TTGATATTGG TGGGCCCACC ATGGTGCGCT CTGCCGCGAA AAATCATGCC
GACGTTGCTG TTCTGACCAG TCCAGATCAG TACGACCGTT TGCTTGAAGC GATGGCTCAA
GCCGGTGGTG AGGTGCCGGC GGCATTACGC CGTCAGCTTG CTCTTGAAGC CTTCCAGCAC
ACTGCGGCCT ACGACACCGC CATTAGCCGC TGGATGGACC AGGCGGTGGC CGCAGATGGA
TCCCCTTGGC TTGAGGCGGT TCCTCTGCGT CAAACCTTGC GCTACGGCGA GAACCCTCAT
CAGAAAGCCC GTTGGTATAG CCATGCCCAG CAGGGATGGG GCGGTGCGGT TCAACTGCAA
GGCAAGGAAC TGAGTACGAA CAATCTGTTG GATCTCGAAG CTGCTCTCGC CATGGTTCGG
GAGTTTGGCT ACGGCTCTGA TGGCGCTGAG CCGGCTGTTC AGCCAGCCGC GGTGGTGGTG
AAACACACCA ATCCCTGTGG TGTTGCCATC GGATCGGATG TGTCAACTGC ACTCACGAGG
GCCTTGGATG CTGATCGAGT CAGTGCCTTT GGGGGAATCG TCGCCATCAA TGGCGTGGTG
AGCGCCGCAG CGGCAGGGGA ACTGAAAAGC TTGTTTTTGG AATGCGTCGT GGCGCCAAGC
TTTTCTCCAG AAGCCAGAGA GATTCTTGCG GCCAAAGCGA ATCTGCGTTT GCTGGAGCTC
CAGCCTGCCG CGATCGATGC GGCGGGCCCC GACCACGTCC GCAGCATTCT TGGTGGATTG
TTGGTTCAAG ACCTAGACGA TCAAGCGATC ACACCAAGCG AGTGGACAGT GGCAAGTCAG
CGGCCTCCCT CATCCCAGGA ACAGCAGGAT TTGGAGTTCG CTTGGCGATT GGTGCGTCAC
GTGCGTTCCA ACGCCATCGT GGTCGCCTCC AAGGGGCAGA GCTTGGGCAT AGGGGCCGGT
CAAATGAACC GGGTTGGCTC GGCTCGCCTC GCGCTTGATG CGGCTGGGGA TCAAGCCACA
GGGGCTGTGC TGGCCAGTGA TGGATTTTTC CCGTTTGACG ACACCGTGCG TCTTGCGGCG
AGCCACGGAA TTACAGCTGT AATTCATCCA GGTGGCAGCT TGCGCGATGC GGATTCGATC
AAGGCCTGTG ACGAACTGGG GCTCGCAATG CTGTTAACAG GCCGTCGACA CTTCCTTCAT
TGA
|
|---|
| Protein sequence | MAPVALLSVS DKSGLLPLAE ALHRIHGYQL LSSGGTAKVL EQAGLPVTRV SEYTGAPEIL
GGRVKTLHPR VHGGILAKRG DAAHQNDLEQ QNINFIDVVV VNLYPFRETV AKADVTWDQA
IENIDIGGPT MVRSAAKNHA DVAVLTSPDQ YDRLLEAMAQ AGGEVPAALR RQLALEAFQH
TAAYDTAISR WMDQAVAADG SPWLEAVPLR QTLRYGENPH QKARWYSHAQ QGWGGAVQLQ
GKELSTNNLL DLEAALAMVR EFGYGSDGAE PAVQPAAVVV KHTNPCGVAI GSDVSTALTR
ALDADRVSAF GGIVAINGVV SAAAAGELKS LFLECVVAPS FSPEAREILA AKANLRLLEL
QPAAIDAAGP DHVRSILGGL LVQDLDDQAI TPSEWTVASQ RPPSSQEQQD LEFAWRLVRH
VRSNAIVVAS KGQSLGIGAG QMNRVGSARL ALDAAGDQAT GAVLASDGFF PFDDTVRLAA
SHGITAVIHP GGSLRDADSI KACDELGLAM LLTGRRHFLH
|
|---|
| |