Gene Syncc9902_0111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9902_0111 
Symbol 
ID3744025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9902 
KingdomBacteria 
Replicon accessionNC_007513 
Strand
Start bp111478 
End bp112683 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content41% 
IMG OID637770277 
Productglycosyltransferase 
Protein accessionYP_376129 
Protein GI78183695 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.451915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCATAC TCGTTTCTCA CGTTAATTAT CCAGCTCAAT TTCGCCGGCT TATTTTTCAC 
TGGTCACAAT CTGGTCATGA TGTAGTTTTT ATTGCTCGTC AATCTGAATG GCATTCCCCT
TCGCCGAAAG GATTCCGCGT TTATTTTTAT GAGAATACCA GAAGTTCCAA TACGATATCC
TTACATCCTT ACTTGAATAG ATTTGAGTCC GCTATTCTTG AAGGCCAGTC TGTCTTTAGA
ATTGCACGTC AGCTTCGCGA TAGCAATTGG ATTCCTGATA TTGTAATTTC TCATTTAGGT
TTTGGTAATG GTCTTTTTTT AAGTGATTGT TTCCCGCATG CAAGGCGCAT TGGTTACGCG
GAATGGTTTT ATAATTCTTA CAATTCTGAT GTTGACTTCT TATCCTCTGA GGTTGTTTCT
GATGATCATA GGCTAAAACT TCGTTGTTGG AATTCGGAGA TACTTTTAGA AATGTCTACG
CTTGATTACT TGATTGTTCC CACCTGTTGG CAAAAATCTC AGTTTCCTTC AATTTATCAT
AATCAAATTT CCGTTATAAA TGATGGTTTG AATTTGCCTT TGCTTTCAAA TATTAAACAT
GCTAATTCTG TGGATTTTAA TTTCCTTCCA AATGATCCTA ATTTGGAAGT CTTGACCTTC
GTTAGTCGTT GTTTTGAGGA GTACAGGGGC TTTCCTCAAG CCATCAGAAC TATTTCTGCG
TTGCAGAAGT TGAGACCTAA TTTACATGTC ATTATCGTTG GAGAAGACGG AGCAGCATAT
GGTCATCCCA GGTCTGATGG TGTCCCATGG TCTGTATGGG CTATTAAAAC TTTGAACTTA
GATCCTTTAA GAACCCACTG GCTTGGTCTT GTGCAAGAAA ATGTTTATTT ACAAGTGTTA
TCAGTGAGCG ACGTTCACTT TTACCTTACT GTTCCTTTCA TTCTCAGTTG GAGTCTACTT
GAGTCAATGG CGGTAGGTTG CTCCATTGTG GCAAGTTCTA CACCTCCAGT TATGGAGTTT
TTAGAGGACG GGCTATCTGC ACTTCTTGTC GATTTCTTCG ATGTGGACGC TCAAGTTCAA
GCTATTAATA CGCTGCTTTC AAATCGAAAA CTCGCATCCC GCTATGCTGA TGCTGCTATG
AACCGTGCCG AAGCACTATC CTTCGACAAG GCGACCGAAT CGTGGGATAC CCTGTTGAAC
GCTTGA
 
Protein sequence
MRILVSHVNY PAQFRRLIFH WSQSGHDVVF IARQSEWHSP SPKGFRVYFY ENTRSSNTIS 
LHPYLNRFES AILEGQSVFR IARQLRDSNW IPDIVISHLG FGNGLFLSDC FPHARRIGYA
EWFYNSYNSD VDFLSSEVVS DDHRLKLRCW NSEILLEMST LDYLIVPTCW QKSQFPSIYH
NQISVINDGL NLPLLSNIKH ANSVDFNFLP NDPNLEVLTF VSRCFEEYRG FPQAIRTISA
LQKLRPNLHV IIVGEDGAAY GHPRSDGVPW SVWAIKTLNL DPLRTHWLGL VQENVYLQVL
SVSDVHFYLT VPFILSWSLL ESMAVGCSIV ASSTPPVMEF LEDGLSALLV DFFDVDAQVQ
AINTLLSNRK LASRYADAAM NRAEALSFDK ATESWDTLLN A