| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9902_0101 |
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| Symbol | |
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| ID | 3744054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9902 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007513 |
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| Strand | - |
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| Start bp | 101031 |
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| End bp | 102050 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637770267 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | YP_376119 |
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| Protein GI | 78183685 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0202415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATAG GTATGAAAAA AATCCTTTTA ACTGGCGGAA CCGGAAGTTT TGGGAAAGCT
TTTATTAAAG AAACAATAAC AAAATATCAA GATGTAGAAA GATTAGTCAT TTATAGTAGA
GATGAACTGA AACAATGGGA ACTACAGCAA ATCTATCCAG AGAAACAATA TCCACAAATT
AGATTTTTTT TGGGAGATGT CAGAGACGAA AACAGATTAC GAAGAGCACT AGAAGGGATA
GATACTGTAG TTCATGCAGC AGCATTAAAG CAAGTGCCAG CAGCAGAATA TAATCCTTTC
GAATTTGTGA AAACTAACAT AATTGGTGCA AACAACTTAA TTCAAGCATG TCTAGATACT
GAAGTATCAA ACATTGTAGC CCTAAGCACT GACAAGGCTG CTGCACCAAT TAACTTATAT
GGAGCCACAA AACTGTGCTC AGACAAGTTA TTCATCGCAG CAAACAATGT CAGAGGCGGA
AAAAATACAA AATTCTCAGT AGTAAGATAT GGGAACGTAA TGGGGTCAAG AGGTTCGGTG
ATACCATATT TTTTAAAAGA AGCCAAAAAT TCAGGAAAAC TAAACATAAC TGACACCAGG
ATGACCAGGT TCAACATAGT GCTAAAGGAA GGCGTAGAGA TGGTACATTG GGCAATAAAG
CAAAGCATGG GTGGGGAAAT ATTTGTGCCT AAGATACCAA GTTATCGTAT TGTTGATGTT
GCTGAAGCTA TTGCACCTTC GTTGAACCAC GAAGTAATAG GAATACGTCC AGGAGAGAAA
ATTCACGAAG AAATGATAAC AACATCAGAC AGCACAACGA CACTTGACTT AGGTAAATAT
TATGCAATTA CGCCTGCTGG AGGTGGAGTA ATTGAAAAAT ATAAAAAAGA AGATAGGCCT
TATGAAAGAG TAAAAGAAGG ATTTACATAC AATTCATTAG ATAATAAACA ATATCTCAAT
ATAAGTGAAA TAAGAGCCCT AATCAGAAGT AATATTGATC ATGATTTCAC ACCAATATAA
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| Protein sequence | MNIGMKKILL TGGTGSFGKA FIKETITKYQ DVERLVIYSR DELKQWELQQ IYPEKQYPQI
RFFLGDVRDE NRLRRALEGI DTVVHAAALK QVPAAEYNPF EFVKTNIIGA NNLIQACLDT
EVSNIVALST DKAAAPINLY GATKLCSDKL FIAANNVRGG KNTKFSVVRY GNVMGSRGSV
IPYFLKEAKN SGKLNITDTR MTRFNIVLKE GVEMVHWAIK QSMGGEIFVP KIPSYRIVDV
AEAIAPSLNH EVIGIRPGEK IHEEMITTSD STTTLDLGKY YAITPAGGGV IEKYKKEDRP
YERVKEGFTY NSLDNKQYLN ISEIRALIRS NIDHDFTPI
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