| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2545 |
|---|
| Symbol | |
|---|
| ID | 3737960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 2362180 |
|---|
| End bp | 2364111 |
|---|
| Gene Length | 1932 bp |
|---|
| Protein Length | 643 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637777130 |
|---|
| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
|---|
| Protein accession | YP_382828 |
|---|
| Protein GI | 78214049 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
|---|
| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTTCA GCGCCGCTCC TACCGAATCC TTCGACGTGA TCGTGGTTGG CGGCGGTCAT
GCAGGTTGTG AAGCGGCGAT CACCGCCGCC CGGCTGGGCC TGAACACTGC CCTATTCAGC
CTCAATCTCG ATCGCATCGC TTGGCAGCCC TGTAACCCGG CCGTTGGCGG CCCCGCCAAA
AGCCAGCTCG TGCATGAGGT GGATGCCCTT GGTGGGGTGA TCGGGCGCCT GGCCGATGCC
ACCGCCATCC AGAAGCGCAT CCTCAATGCC AGCCGCGGCC CTGCGGTGTG GGCCTTGCGC
GCCCAAACCG ACAAGCGCCT TTATTCCCGC CAGATGCTGC AGCTGCTGCA GCACACCCCC
AACCTCGCCC TGCGCGAAGC AATGGTGACC GGCCTGGAAA CCACCGTTGC AGGCGACCAG
CAACGCATCA GCGGCATCCG CACCTATTTT GGCAGCGTCT ACGGCGCTGA CGCGGTGATC
CTCACCGCCG GCACCTTCCT CGGCGGCCGC ATCTGGGTGG GGCATCAATC GATGGCCGCC
GGCCGCGCCG GAGAGCAGGC CGCCGAAGGG CTCACCGAAA CACTGCAGGA ACTGGGCTTC
CAGACCGACC GGCTCAAAAC CGGCACCCCC GCCCGGGTAG ACCGGCGCAG CATCGCCCTC
GATCAACTGG AGGAGCAGCC CAGCGATGCA GCCGATCGCT TCTTCTCCTT TGACCCGGCC
GCCTGGGTGA GCGGTGAGCA GATGAGCTGC CACATCACCC GCACCACCGC AGAAACCCAT
CAGCTGATCC GCGACAACCT GCACCTCACC GCCATCTATG GCGGGGTGAT CGACAGCAAG
GGCCCGCGCT ATTGCCCCTC CATCGAAGAC AAGATCGTTC GCTTCGCGGA CAAGGACAGC
CACCAGATCT TCCTCGAGCC GGAGGGGCGC GACACCCCGG AGATCTATGT GCAGGGCTTC
TCCACCGGCC TGCCGGAACC GATCCAGCTG CAACTGCTGC GCAGCCTGCC GGGCCTGGAG
CAAGCCGTGA TGCTGCGGCC GGCTTACTCG GTGGATTACG ACTATCTGCC CGCCACCCAG
CTCAAACCCT CCCTGGAGAC CAAACGGGTG CGCGGCCTGT TCAGCGCCGG TCAGCTCAAT
GGCACCACGG GCTATGAGGA AGCCGCAGCC CAGGGCCTGG TGGCCGGCGT TAACGCCGGC
CGGCTGATCG GCGGCCAGGA GCCGGTGCAC TTCCCCCGCG AGGGCAGCTA CATCGGCACG
ATGATCGACG ATCTGGTGAG CAAAGACCTG CGCGAGCCTT ACCGGGTGCT GACCAGCCGC
AGCGAATACC GCCTGATCCT CCGCGGTGAC AACGCCGACC GCCGCCTCAC ACCATTGGGC
CATGAGCTTG GACTGATCGA CGACCGCCGC TGGCAGCTGT TCGAAGACAA ACTCCAGGCG
ATGGAGGGCG AAAAGCAGCG GCTGGAAACC GTGCGGCTCA AGGTGAGCGA TCCGGTGGCC
CCTGCGGTAG AACAAGAAAC CGGTGCAGCA ATCAAAGGCT CGATCACCCT GGCCGATCTG
CTGCGCAGAC CTGGCATGCA CGCCGCCGAT CTGGTGCGCC ATGGCCTGGC CGATGCCGAT
CTGCCCCTGC CCGTACGCGA GGGCGCCGAA ATCGACATCA AATACAGCGG CTACCTGCAA
CGCCAGCAGC AACAGATCGA TCAGGTGAAA CGCCAGAGCC AGCGCAAGCT GCCGGCCGAT
CTCAACTACG CCGGCATCGG CACGCTTTCC AATGAAGCCC GCGAAAAGCT CACGGCGATT
CAACCCAGCA CCCTGGGGCA GGCCAGCCGC ATCCCTGGCG TCAGCAAAGC CGACATCACC
GCCCTGCTGA TGTGGCTGGA ACTGCAGCAA AGGGAACGCC AACCCCTCGC CCCCACCGCA
GAAGCTCGAT AG
|
|---|
| Protein sequence | MSFSAAPTES FDVIVVGGGH AGCEAAITAA RLGLNTALFS LNLDRIAWQP CNPAVGGPAK
SQLVHEVDAL GGVIGRLADA TAIQKRILNA SRGPAVWALR AQTDKRLYSR QMLQLLQHTP
NLALREAMVT GLETTVAGDQ QRISGIRTYF GSVYGADAVI LTAGTFLGGR IWVGHQSMAA
GRAGEQAAEG LTETLQELGF QTDRLKTGTP ARVDRRSIAL DQLEEQPSDA ADRFFSFDPA
AWVSGEQMSC HITRTTAETH QLIRDNLHLT AIYGGVIDSK GPRYCPSIED KIVRFADKDS
HQIFLEPEGR DTPEIYVQGF STGLPEPIQL QLLRSLPGLE QAVMLRPAYS VDYDYLPATQ
LKPSLETKRV RGLFSAGQLN GTTGYEEAAA QGLVAGVNAG RLIGGQEPVH FPREGSYIGT
MIDDLVSKDL REPYRVLTSR SEYRLILRGD NADRRLTPLG HELGLIDDRR WQLFEDKLQA
MEGEKQRLET VRLKVSDPVA PAVEQETGAA IKGSITLADL LRRPGMHAAD LVRHGLADAD
LPLPVREGAE IDIKYSGYLQ RQQQQIDQVK RQSQRKLPAD LNYAGIGTLS NEAREKLTAI
QPSTLGQASR IPGVSKADIT ALLMWLELQQ RERQPLAPTA EAR
|
|---|
| |