Gene Syncc9605_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2368 
Symbol 
ID3736532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2180036 
End bp2181631 
Gene Length1596 bp 
Protein Length531 aa 
Translation table11 
GC content67% 
IMG OID637776956 
Producthypothetical protein 
Protein accessionYP_382655 
Protein GI78213876 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCCG GCTCAGCTCC TGAACCAGCC CCCTGGGTCG CATGGGCAGG GCTGGGCTTG 
GCCGCTGCTG TGCTGGCCCT GGTCGGCCTC GACGGTCTCC CCCTGCGGGA CTTCGATGAA
GCCACCGTGG CCCGGGTGGC CCTCGAACTG CGCCACGGGC TCGGGGAAGC CCCGTTGCTG
CCCACCCTCT GGGATAAGCC CTACCTCAAC AAGGCGCCAG GTCTGCACAG CCTGATCGCC
CTCGTGATCA GAGCAACAAC GCAGTCCGAT CAGCTCCCCT CGGAGTGGAG CATCCGCCTG
GCACCGGCCA TGCTTTCGTG CCTGGTGGTG CCGCTTGGTG GCTGGCTCCA ATGGCTGCTG
CGACCAGGGG ATCGCTCCAG TGCCCTCTCC ACCAGCGTAA TCCTGCTGAC GCTGTTGCCG
GTGGCCCGGC ACGGACGTCT GGCCATGTTG GATGGCACCC AGCTGACGGC CACGGCTCTG
CTTTGGCTGG CCCTGCTGCA GCTGAACCGC AGCCGCTGCA GCTCACTCTG GGGAGCCGTC
GCCGGCCTGA TGGCCAGCGC CATGCTGCTG CTTAAAGCCC CACTGCTGGT GCCCGCGGCG
GTGGCCGCCG GTTTGGCGCT GGCATGGGGC CGGGAATGGA GAAGCTGGAA CAACCGCCCT
GCAGCCTGGC TCGGGATGAT GCTGGGCCTA GCACCGGGAG TCGGCTGGCA TCTCTGGCAT
GCCCACATCC GGGGGAGCGA AGCGCTCTGG CTCTGGGGCG GAGATGGCGC CGGGCGGGTG
CTTCTGGATG CTGGCGAAGG CAGTGATCTG GGATGGCGGG TCCCGCTAAT CGAAGTACTG
GAGGGGGGCT GGCCCTGGCT GCCGCTGCTG CCCTTCGCAC TTGTCTGGGC CTGGCGACGG
CGTCAGAGCC GCTGGGCCCG ATGGTCCTTG GCCAGCCTGC TCACCCTGGC CGGGGCCATT
CTTCCGCTGC GCACCCAGCT CCCCTGGTAC AGCCATCCGC TCTGGCTGCC CATCGCTCTT
CTCTGCGCTC CGCTGCTGGC CTGGCTGGTG GAGCGACCCT TGTCTTCAAC GCGTGCACCG
GAAAGCCCCA ATCCCCCTTG GCGCTGGTTG CTGATGCAGC TTCCTTCGTT CTGGTGCGGG
CTCGGACTGC TGCTCCTGCT GCTGGGGCTG GGCAGCTTCA GCAGCATCGG CGCAAGCCTT
GTGCCCTATC GCGGCCTGGC GGCCGTGCTG GGCCTCGGCT GGTGTAGCGG CGGATGGTGG
CTGCGCTCTG CAGCACCACA GCGACGACGC CTTGGGGTGA TCAGCCTCAG CTGCGGCAAT
CTGGCAGCGC TGGCCCTGCT GTTTCACTCC CCCCTCTGGT TGTGGGAGCT CAACGAAACC
TGGCACGTGC AACCGGTGGC AGCCCTGGCC AGAGCCAATA CTGGAAGCGA GATCAAGCTG
AAGGGTTACG ACGAGCGTCC CAGTCTCAAC TGGTACGCCG AACAACGCAT TGAGCGTTTC
AAAGGTGGCC CAGGCCGCCG TCTCAGCGAC AAACCGCAGA AGGGCTGCAT CACCGAAGGC
CAAGCGGGGC GATGGACCCT GGCCAACTGT CGGTAG
 
Protein sequence
MRSGSAPEPA PWVAWAGLGL AAAVLALVGL DGLPLRDFDE ATVARVALEL RHGLGEAPLL 
PTLWDKPYLN KAPGLHSLIA LVIRATTQSD QLPSEWSIRL APAMLSCLVV PLGGWLQWLL
RPGDRSSALS TSVILLTLLP VARHGRLAML DGTQLTATAL LWLALLQLNR SRCSSLWGAV
AGLMASAMLL LKAPLLVPAA VAAGLALAWG REWRSWNNRP AAWLGMMLGL APGVGWHLWH
AHIRGSEALW LWGGDGAGRV LLDAGEGSDL GWRVPLIEVL EGGWPWLPLL PFALVWAWRR
RQSRWARWSL ASLLTLAGAI LPLRTQLPWY SHPLWLPIAL LCAPLLAWLV ERPLSSTRAP
ESPNPPWRWL LMQLPSFWCG LGLLLLLLGL GSFSSIGASL VPYRGLAAVL GLGWCSGGWW
LRSAAPQRRR LGVISLSCGN LAALALLFHS PLWLWELNET WHVQPVAALA RANTGSEIKL
KGYDERPSLN WYAEQRIERF KGGPGRRLSD KPQKGCITEG QAGRWTLANC R