Gene Syncc9605_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2210 
Symbol 
ID3737105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp2021232 
End bp2022305 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content58% 
IMG OID637776798 
Productpolysaccharide export outer membrane protein 
Protein accessionYP_382504 
Protein GI78213725 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1596] Periplasmic protein involved in polysaccharide export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGCCC AGCCCACCTT GGCGCTGCAG GCACCGCCCC CGCTCCCAAC CACTCCTGGC 
CTGCCTCCGA GGGGTTACCG CTATCGCCTT GCTCCTGGGG ATCAGCTGGT GACCTCAGTG
TTCAAGATCG ATGGTTACGA GGCTGAGGTT CAGGTGTTGA GCGATGGCAC CATCAACCTG
CCGCGACTGG GAACGGTTGA AGTTTGGGGA TTGACGCTTG AGGAAGCGCG TCAACGTATT
ACTGACGGTT ACAGCCGATT TCTGCGGCGA CCGTTGGTCT ACCTGGACCT TGTGAAACAG
CGTCCGGTTC GGGTCACGGT CACGGGCGAG GTCGCTCGCC CAGGTGTTTT CACTTTGCCT
GTCAACGGTG ATGCATCCCT GGGTTCGACG AGCGATCTCT CTGATGTAAG TGTTGGAAGC
GATGGCGGCG GCTGGCCGAC CATGGTGGAT GTGATTCAAA AAGCTGGCGG ACTTTCAGCG
ACTGGTGATC TGGGCCGATT GGAACTGCTG CGCCCCTCTC CCGCCCCTGG TGGTCAAACT
CAGAGCTTCA TTTTCGACTA TCTGACCGTT TTGAAGGAGG GAGGTTTTGC CCCGAATCCT
CTGATCTATG ACGGCGACAG CATCAGAGTG CACAAGGCGA AAACAGCTAC CAATCTGGAC
TTGTTGACAG CTTCTGCTTC GAACTTCGCC CCGGCGGCAA TCAATGTGCA AGTTGTTGGT
GAGGTTTTAG CCCCAGGCGT GGTCCAAATC GGTTCGAATG CACCTTTATC TAGCGCGATC
CTTGCCTCCG GAGGAGTCAC CCGACGCGGC AGTGTGAAGC GCGTGAACCT GATCCGCATT
GATCGAAAGG GACGCCCCAC GGTGAAGCAG TTGCGCTACG AGCCCAATGC TGTCCTCAGT
AGTGCCAACA ATCCGCCCCT GCGCAATGGC GACGTCGTGG TGGTGGACCG CAACACCTTC
ACCAAGGTCA CCGACACGAT GACCGACGCC ATGCTGCCGT TTGAGCCGGT TGTGGATGCG
GTCTCGGTGT ACCGCTTACT TGGTTTGCCA ATGCCGTCGA ATGTCGGCCG TTGA
 
Protein sequence
MEAQPTLALQ APPPLPTTPG LPPRGYRYRL APGDQLVTSV FKIDGYEAEV QVLSDGTINL 
PRLGTVEVWG LTLEEARQRI TDGYSRFLRR PLVYLDLVKQ RPVRVTVTGE VARPGVFTLP
VNGDASLGST SDLSDVSVGS DGGGWPTMVD VIQKAGGLSA TGDLGRLELL RPSPAPGGQT
QSFIFDYLTV LKEGGFAPNP LIYDGDSIRV HKAKTATNLD LLTASASNFA PAAINVQVVG
EVLAPGVVQI GSNAPLSSAI LASGGVTRRG SVKRVNLIRI DRKGRPTVKQ LRYEPNAVLS
SANNPPLRNG DVVVVDRNTF TKVTDTMTDA MLPFEPVVDA VSVYRLLGLP MPSNVGR