| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_2178 |
|---|
| Symbol | |
|---|
| ID | 3735604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1994321 |
|---|
| End bp | 1995616 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637776766 |
|---|
| Product | small GTP-binding protein domain-containing protein |
|---|
| Protein accession | YP_382472 |
|---|
| Protein GI | 78213693 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1160] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.995116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.41065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAA TGCAACCCAC CCCGCCCCAC ACCATTGAGC GCTGCCAGCT GCTGCTGGAG
CAGTGGCACA GTCAGCTTCA GCTGAGCCCA CGGGACCAGG GACTGCTGGG GGGCCAATTG
CAGCTACTGG ATCGTCAGCT GCAACGGCTG CAGCAACGAC ACCTGCGCAT TGCGCTATTT
GGTCGGGTGG GGGTTGGCAA ATCCAGCCTG ATCAATGCCT TGATCCGCCG CCCACTGCTG
GCAACGGATG TCGCCCACGG CAGCACCCGC CGTCAGCAGG CGGTGGACTG GCCCGTGGAG
ATTGCCGGGC TGACCAGGGT GGAACTGGTG GACACCCCCG GCATTGATGA AATCGATGCC
GCCGGGCGGG CGCGCTTGGC CTCCCGCGTG GCCATGGGGG CCGATCTGGT GCTGCTAGTG
GTGGACAGCG ACCTGACCCG GGCCGACCTG GAGGCCTTAC GCACGCTGCT GGAGAGCGGC
AAGCCCCTGC AGCTGGTGCT GAACCGGAGC GACCGCTGGC CGAAGCAGGA ACGTGCCACC
CTGCTGCGCA GCATTCGCGC AAGGCTGCCG GTGGATCTGC CGATCACCGC GGCAGCGGCA
GCACCCCGCA GCCCCCAGAT CCAGGCCGAT GGGCGGGTGC GCAGCAGGAT CACGACGCCA
CAGGTGCAGG ATCTGCAGAA GCAGCTCTGC CAACAGCTGG AGAACGAAGG CACCCTGCTG
CTGGCGATCC AGTCGCTGCG CCAGGCCGAC CACTTCCAGA AGGCCTGCCA AGAACTAAGG
CTGCAACAGC ACCGCCGCAC GGCCCAGAGC CTGATCGGTC GTTATGCAGC CGCCAAGGCC
ACGGGCGTGG CCGTCAACCC AGTGATGGCC CTGGATATGG CGGGAGGCAT GGCCTGCGAC
ACCGCCCTGG TGCTGCAGCT CAGCCGTCTC TACAACCTGC CGATGACACC AACGGCGGCA
CGGCTGCTGC TCACCCGACT CTCCAGCCAC AACGCCTTGT TGGGCGGGGT GCAGTTGGGG
CTGGCGGCCC TCAAGCAGGC ACTGCTTCTG CTGGTGCCGG TGAGCGGCGG CGGCAGCTTG
GCCCCTGCAG CCCCGGTGGC CCTGGCCCAA GCCGCCCTTG CGGTGCACGC CAGCCGCCGA
ACCGGGCGTC TCGTAGCTCA GCAGTTGCTG CGCCGACGCG GTGGACAACC CGGTGCGCTG
CTGCGCCGGC TGGCCGAACG TGATCCCGTG GTGCACCACT GGCTGTTGCG CTGGCCCAAA
GTCCTGGAGC AGGATCTGCA ACCACTGCTG CCCTGA
|
|---|
| Protein sequence | MNGMQPTPPH TIERCQLLLE QWHSQLQLSP RDQGLLGGQL QLLDRQLQRL QQRHLRIALF
GRVGVGKSSL INALIRRPLL ATDVAHGSTR RQQAVDWPVE IAGLTRVELV DTPGIDEIDA
AGRARLASRV AMGADLVLLV VDSDLTRADL EALRTLLESG KPLQLVLNRS DRWPKQERAT
LLRSIRARLP VDLPITAAAA APRSPQIQAD GRVRSRITTP QVQDLQKQLC QQLENEGTLL
LAIQSLRQAD HFQKACQELR LQQHRRTAQS LIGRYAAAKA TGVAVNPVMA LDMAGGMACD
TALVLQLSRL YNLPMTPTAA RLLLTRLSSH NALLGGVQLG LAALKQALLL LVPVSGGGSL
APAAPVALAQ AALAVHASRR TGRLVAQQLL RRRGGQPGAL LRRLAERDPV VHHWLLRWPK
VLEQDLQPLL P
|
|---|
| |