Gene Syncc9605_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2167 
Symbol 
ID3735593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1983034 
End bp1984452 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content38% 
IMG OID637776755 
Producthypothetical protein 
Protein accessionYP_382461 
Protein GI78213682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0111155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.129815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATGAAG AGAGGAACAC AGTGAATAAA AATTTGAGTT CTAAAAAACC AATAAAGTAC 
AAATTTCATA TTCCTTCTAA AAAGCTTCCC AGCTCTCTTG CTCAAAAGAT CTGTAGTCCA
CTATGGAAAA ATATAATTCA TTCAATTGAA ACCGGCAACG TTGAAACAAT TCAAGCATTA
GTCAAATCAA TTGACAAGAA GCAGGAAGCA ATTTACTTAC CTCATCCATT CCTAGAAAAT
TTAGATACTT TTGTTACTAA AAATATCCGG CAAGGCATGT GTAACTTTAT TTTCTTTAGC
GACTCAAACA ACCAAAATCA ATGGATCCTA TGCCAATGCA CATCATTTGT TGATGCAATC
TTTACAGAGT CATATTCAGG CAAACATAAG TCTTCTGTTA ACGACGATGT AATTTTAAAT
GCAATCAAAA GACTTTTCAA TGGCAAGAAT AAGATAAGCT CGAGAAGGTA TGGCACGAAA
AAGGCAACAT TTTCCGGCTA CCTCCTCGAT CAAAAAAGAC CATACCATCA CTTCTACGAT
CAACTTAAAT GGCTTGTCTG GCTAGAGACT GACAAGCCAA TCATTAGCAA CAACTCTTTT
TTCATCCCTA GACATTACAA GAAGCTCTCA GTAACCCAAA AAAAACAGCC CACATTTTCC
CTCTTTCCAT TGGTCATCGG CTCGAATCAG TTGAAAATGA AGCTTGATCA ATATTCCGAA
AAAATGGAGA AAGTTGTCTA CCTAGACAGT TCCAAAGGCT GGTACAACAA CATCATATGG
AATCGATTGA ATCAAGTATT CAACCAAATC AGAAAAGTAT TTAATAAAAG CAATACCCTC
ACTCTTTGGT TTGGTATTTC TGGGCAGAAA AGGATATGGA TCGAACAAGA AGACTTTCTC
CCCGCTTTTG TACAACAACT AACGCCTTGG TTTGATTCGT TTGTGTTTAT GGTTGATGGT
TTTACCGAAT ACGAGAATTC AAATCATGCT CGCCTGAGTG GAAGCAAAGC AACCCCAGTC
AATCAAGATC TTGAAGTTGT CACTTCGATT AGGCAAAAAT TATTACCTTT TCCCAATGTG
TCGGTCGTAA GCCTGGTGGG ACAAACGTAC CGAGAGAAAA TACAACGCTG TCAAGATGTT
GATTTCTTTA TTGCCAATGC GGGCGCCGGC CAACTTGTTC CACATCGCTT CTGCAAAAAA
CCAGGTATTT TGCACTCCAA TGAAAAACAT TGCGTTTTTC CAACAGGAAT TAACAACACT
ACCGTCAAAA TAGTCGATAA ATCTCTGGTC AAGGACGTAG GCAATTTATT TGCAAAAGGG
ACATCAAACA AAAATCTGGG TGCCGGACTT ATTAGCTATA GTATTAAGAC AGAAATTGTT
ATTAACATGG TCACAGACAT GCTAGATCTC GACGATTAA
 
Protein sequence
MDEERNTVNK NLSSKKPIKY KFHIPSKKLP SSLAQKICSP LWKNIIHSIE TGNVETIQAL 
VKSIDKKQEA IYLPHPFLEN LDTFVTKNIR QGMCNFIFFS DSNNQNQWIL CQCTSFVDAI
FTESYSGKHK SSVNDDVILN AIKRLFNGKN KISSRRYGTK KATFSGYLLD QKRPYHHFYD
QLKWLVWLET DKPIISNNSF FIPRHYKKLS VTQKKQPTFS LFPLVIGSNQ LKMKLDQYSE
KMEKVVYLDS SKGWYNNIIW NRLNQVFNQI RKVFNKSNTL TLWFGISGQK RIWIEQEDFL
PAFVQQLTPW FDSFVFMVDG FTEYENSNHA RLSGSKATPV NQDLEVVTSI RQKLLPFPNV
SVVSLVGQTY REKIQRCQDV DFFIANAGAG QLVPHRFCKK PGILHSNEKH CVFPTGINNT
TVKIVDKSLV KDVGNLFAKG TSNKNLGAGL ISYSIKTEIV INMVTDMLDL DD