Gene Syncc9605_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2129 
Symbol 
ID3735630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1950911 
End bp1951357 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content59% 
IMG OID637776716 
Producthypothetical protein 
Protein accessionYP_382423 
Protein GI78213644 
COG category[S] Function unknown 
COG ID[COG3305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.41593 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.630208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG CAGCCGACAA GGGACTTTGG CTGATCCGCT TGATCGTGAT CAAAAAAGTC 
CTGCTCGCAG CCGTGCTGCT GGTGATCAGC CTGGCCGCTT TGTATGGCGA TATTCATTAC
GCACAGCTTT CGGACTTCGC CGACACCTGG GGCCAGGCCG ATCGCCGGCT TTTGGCAGCC
ATGGCCCAAC AGGGGGCTGT GCTAGGCCCG ACGCGCTTGA TCCAGTTGGC GGTAGTCTCA
GCCCTTTATG CGCTGCTGAT CCTCGTTGCA GCTTGGGGCA CGTGGTTTGG TCGTCGCTGG
GGTGAGTGGT TATTGGTGGC GCTGCTGGCT TTAGCTCTTC CTCTCGAGAT CATGCACGCC
TTGCACGAAC AAAGCCCCAG AACGTTTGTC GTCCTGGGGC TCACAGTTCT GGGGCTGGTG
GTAACCAGCC GTCGGGTTTT GCGTTGA
 
Protein sequence
MSKAADKGLW LIRLIVIKKV LLAAVLLVIS LAALYGDIHY AQLSDFADTW GQADRRLLAA 
MAQQGAVLGP TRLIQLAVVS ALYALLILVA AWGTWFGRRW GEWLLVALLA LALPLEIMHA
LHEQSPRTFV VLGLTVLGLV VTSRRVLR