Gene Syncc9605_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2054 
Symbol 
ID3735705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1874902 
End bp1875441 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content66% 
IMG OID637776640 
Productheat shock protein DnaJ-like 
Protein accessionYP_382349 
Protein GI78213570 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.340883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACC GGTCGTCCCC TGTGTCCGAA GCCCGCCCCA GCCATCACGA ACGGCTTGGC 
GTGCGTCCCG GGGTTGACGC TGAAACCTTG CGCCAGGCCT TTCGACGCCA GTCCAAGGCC
CTGCATCCCG ACACCACGCA ACTGCCGCCC GAGCAGGCCA GCATTGCTTT TCAGGAGCTC
AAGGAGTCCT ACGACGTTCT GCTGCGCCAG AGCCAAGCAA CCCTCAGTCT TGGCGCCAAA
GCGCCTTCAT CGCCTCCGCC CCTGCAGCAT CAGTCCCGCC CGGATGCCTG GCAGGGCATC
GGTCAACGGA GGCCCCTCTC CGGTGGGGAA TGGTTCTCGC TGGTGCTGTT GAGCATCGCG
CTGTTGCTCA GCCTGGTGCT GGGGTTGGGG GTGGCCCTTG CTCAGGGCCG CGACTGGCAG
GTGTCGCCGA GTTGGCTGGC GGATGAGCAG ACTCAGAGCA CATCCGTGCG TTTGCAACCT
GATGGCCGCC CTGCCCCCGG AGAGCACCCC GCTGAATCAG CACTCTCTCC CGGCGCTTGA
 
Protein sequence
MKDRSSPVSE ARPSHHERLG VRPGVDAETL RQAFRRQSKA LHPDTTQLPP EQASIAFQEL 
KESYDVLLRQ SQATLSLGAK APSSPPPLQH QSRPDAWQGI GQRRPLSGGE WFSLVLLSIA
LLLSLVLGLG VALAQGRDWQ VSPSWLADEQ TQSTSVRLQP DGRPAPGEHP AESALSPGA