Gene Syncc9605_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2050 
Symbol 
ID3735701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1871509 
End bp1872273 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content66% 
IMG OID637776636 
Productbiotin biosynthesis 
Protein accessionYP_382345 
Protein GI78213566 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.146243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGGG GCCCTGTGAT TCGCCCCGAC CAGGTGCTGG AGCGCTTCAG TCGCGCAGCA 
CCGACCTACG CAGGCGAGGC GTTACTGCAA CGGGCCATGG CCTGGCGCCT GGCCCAACTG
AGCCGTCGCT GCTCCATCCG GCGCGGCCTA TGGGCTGACC TGGGCAGCGG CACCGGTCAT
CTGGCCGCAG CCCTGGAAGT CGCTCATCCG GGACAGCAGG TGATCCGCCT TGATGGGAGT
GCCGCGATGT TGAACAGCCA CCCCCATGGA ACACACACCC TGCGGTATGA CCTGAGCCGC
GGGTTACCGG ACTGGAGTGA GCCACCGCAA CTGCTGGCCT CCAGCTTTGT TTTGCATTGG
TTGCCGGATC CAGCCCAGCA GCTTCGGCGT TGGGTGGATG CCCTGCCAAA GGGGGGCTGG
CTGGCCCTGG CGGTGCCGGT GGCCGGGAGT TTTCCGCAAT GGCAGCATGC CGCCTATGCA
GCCAATCAAA CCTGCACGGC CTTGTCCATG CCGGTGCGGG AGCAACTGAT GGCAGCCCTG
CCGCATGGCG TGGTGCAAAG GGACGAATGC CTGAGCTTCA CCCAACACGC CGCCAATCCA
CTGCGGCTGC TGCGACCGAT GAGCAGCATC GGCGCCTCCG TTACCAATGG GGGCCAGCTC
TCGACAGGCC AGTGGAAGGC CATCTTCCGG GCTTGGCCCC AAGCCGATGC ATCAGCCGGG
TTCGCCCTGA CCTGGAGGAT GTGGGTCCTG ATGGTGAAGC GATGA
 
Protein sequence
MAGGPVIRPD QVLERFSRAA PTYAGEALLQ RAMAWRLAQL SRRCSIRRGL WADLGSGTGH 
LAAALEVAHP GQQVIRLDGS AAMLNSHPHG THTLRYDLSR GLPDWSEPPQ LLASSFVLHW
LPDPAQQLRR WVDALPKGGW LALAVPVAGS FPQWQHAAYA ANQTCTALSM PVREQLMAAL
PHGVVQRDEC LSFTQHAANP LRLLRPMSSI GASVTNGGQL STGQWKAIFR AWPQADASAG
FALTWRMWVL MVKR