Gene Syncc9605_2034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2034 
Symbol 
ID3737710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1852271 
End bp1853155 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID637776620 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_382329 
Protein GI78213550 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGC TGCTCACCGG AGCTGGCGGT CAGCTGGGCC AAGCTCTGAT CGCATGTGCC 
CCTGATGGAA TCGAGCTGGT GGTCACGAGC CGCCAGGAGC TTGACCTGGC GGACCCTGAA
GCCTGCGGCG GCGCTGTGAA ACAGCACAAG CCCGACTGGG TGCTCAACGC CGGTGCTTAC
ACAGCGGTGG ACAAGGCCGA GTCGGAGCCC GAGCTGGCCC ATGCCGTGAA TGCCGGGGCA
CCGGAGGCCT TTGCCCGCGC CCTTGATCAA CAGGGGGGAC GCCTGCTCCA GATCAGCACC
GACTTCGTTT TCAACGGAAC CCAGGGCAAG CCGTATCAAC CTGAGCAGGC CCGCGACCCT
CTCGGTGTGT ATGGGGCAAG CAAAGCTGCA GGAGAAGCAG CAGTCCAAAG CATTTTTGGA
GCAAGAGGCC AGGGCCTGAT CCTGCGCACC AGCTGGGTGA TCGGGCCCGT GGGCAAGAAC
TTCGCCCTCA CCATGCTCCG CCTTCATCGC GAACGGGATC AACTGGGTGT TGTCGCCGAC
CAGGTGGGCT GTCCTACCAG CACCCTCAAC CTCGCTCAAG CCTGTTGGCA GACCCTTCAG
ATCGCTGGTG ACCGCGAATT GCCAGCTGTG ATGCACTGGA GTGATGCAGG CGCTGCCAGC
TGGTACGACG TGGCGGTGGC CGTAGGCCAG ATCGGTGCTG ATTTGGGGCT CATCGACACG
CCCGCAGCCG TTCAACCGAT CACCACAGCC GACTACCCGA CACCTGCTGA ACGACCGGCC
TACTCCCTTC TTGACTGCAC CTCCACCCGC GCCGCCTTGG ACCTCAACGG TGAGCACTGG
CAGCAAGCCA TCAAAACCGT GTTGCAGCAA GCTAAAACGC CATGA
 
Protein sequence
MKVLLTGAGG QLGQALIACA PDGIELVVTS RQELDLADPE ACGGAVKQHK PDWVLNAGAY 
TAVDKAESEP ELAHAVNAGA PEAFARALDQ QGGRLLQIST DFVFNGTQGK PYQPEQARDP
LGVYGASKAA GEAAVQSIFG ARGQGLILRT SWVIGPVGKN FALTMLRLHR ERDQLGVVAD
QVGCPTSTLN LAQACWQTLQ IAGDRELPAV MHWSDAGAAS WYDVAVAVGQ IGADLGLIDT
PAAVQPITTA DYPTPAERPA YSLLDCTSTR AALDLNGEHW QQAIKTVLQQ AKTP