Gene Syncc9605_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_2014 
Symbol 
ID3736643 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1834018 
End bp1834698 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID637776600 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_382310 
Protein GI78213531 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC CAGCCCAAGA GCTCCCCGAC CTACCCCCCC GGCTGGATCA GGCGATCCTC 
GACCCCCTGC TGACCCGGGA CCAGCTTCAA GCCCTCTGTG ATTCCGGAAT GCAGGAGGGC
GTGCGGGCCT TCTGTACCAC ACCGCGTCAG CTGCCGATGC TGCGGGAACG CATCGGGACC
ACCGACGCAG GCCCCCGACT TGTTGCCGCC ATCGGCTTTC CCTTCGGAGC CATTCCCGCT
GAGCTCAAGC TCGCGGAAGC GGAGTGGTGT GCCGCCCATG GCGCCCAGGA GCTCGATGTC
GTGCCCGATT TCAGCGCCTT GGCGAACGGC GATTCAGGCG CGTTTGCCGA GGAACTCGCC
GCCCTCTGCG AGCTGGGGCT TCCCGTGCGG GCCGTCCTGG ACATGGCCCG TCTGGAGAAC
GAACAGCTGG AACTGGCCGT GGAGGCCGCC ATTGATGCTG GCTCTGCGGG ACTGCAAACC
AGCAACGGCT TTGGCCCGGC CTGTCATGCC GATCAAATCC TTGCGTTGAA AAAGCTGATC
CGCAAACGCT GCGCCATCAA GGCAGCCGGG GGGATCCATA GCCTCAGCCA CGCAGGAGAC
CTGCTGTTGG CGGGAGCCGA TCTGCTGGGC ACCAGCAGCG CACCGGCCCT TCTGCAGGCC
CAGCGCCGCC CCGCGGCCTG A
 
Protein sequence
MADPAQELPD LPPRLDQAIL DPLLTRDQLQ ALCDSGMQEG VRAFCTTPRQ LPMLRERIGT 
TDAGPRLVAA IGFPFGAIPA ELKLAEAEWC AAHGAQELDV VPDFSALANG DSGAFAEELA
ALCELGLPVR AVLDMARLEN EQLELAVEAA IDAGSAGLQT SNGFGPACHA DQILALKKLI
RKRCAIKAAG GIHSLSHAGD LLLAGADLLG TSSAPALLQA QRRPAA