| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1974 |
|---|
| Symbol | |
|---|
| ID | 3736371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1795288 |
|---|
| End bp | 1796709 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637776559 |
|---|
| Product | putative nicotinamide nucleotide transhydrogenase, subunit beta |
|---|
| Protein accession | YP_382270 |
|---|
| Protein GI | 78213491 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1282] NAD/NADP transhydrogenase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.957633 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.315931 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT TTCTCAAATA CGCGATCGAG CTGGTTGCGG TTCTGCTGCT GGCTCTCGGC
ATCAAAGGTC TCTCCAAGGT GCGTTCCGCG AGGGGCGCCA ACCAGCTGGC CGCTGTGGCC
ATGGGCCTTG CGGTGCTGGG TCTGCTGATC AACTACCTGG GCACCAGCGG CATCAGCATC
GCCGCCTGGA CCTGGATCAT TTCCGGAACG TTGGTGGGTG GTGTGCTCGG CGCTATCACC
GCCCAGCGGG TGCCGATGAC CTCGATGCCG GAGACGGTCG CCCTTTTCAA CGGCTGCGGT
GGCATGTCGT CACTGCTGGT GGCCCTGGCT GCTGCGCTTT ATCCGGCGGC CCTCGATGCG
GCAGGCCCCG TGGCAGTGGT GTCGATCGTT GTCTCCGTTT TCGTTGGTGC GATCACCTTC
ACCGGCTCGA TCGTGGCCAT GGCCAAGCTG CAGGGTTGGC TGTCCACGCC GGCCTGGATG
CAGAGCAAGG CGCGCCATGC CGTGAACATC GCGCTGGCGG TGGCATCCCT GGTGGGTGCC
GTTGAAATGC TGCGCAACGC TGATTCGAGC ACGGGCCTCT GGCTGCTGGT GGCGGCCTCC
GGCCTGCTGG GGATCGGGGT GACGCTGCCG ATCGGCGGCG CCGACATGCC CGTGGTGATC
TCCCTGCTGA ACAGCTATTC CGGTGTGGCT GCTGCCGCTG CCGGTTTCGT GGTGGGCAGC
CAGTTGCTGA TCGTGGCCGG CGCCATGGTT GGTGCTGCCG GCCTGATCCT CACCCAGGTG
ATGTGCAACG GCATGAACCG TTCCCTGGTG TCTGTGCTGT TCGGTGGCGC CCTGGGTGCC
ACGAGCGCTG CAGGTGGTGG CGGCGGTGAA TACACCAACA TCACCAGCTG CAGTGTTGAG
GAATGCGCCC TCACCCTCGA GGCAGCTGAA CGGGTGGTGA TTGTTCCGGG CTATGGCTTG
GCCGTGGCTC AGGCGCAACA CACGCTCAGG GAAGTGACTC GGGTGCTGGA GAGTGCTGGC
ATTGATGTGG CCTATGCCAT TCACCCGGTG GCCGGCCGTA TGCCGGGTCA CATGAACGTG
CTCCTGGCTG AGGCCGATGT GCCCTATGAG CAGCTTCAGG AGATGGATCA GATCAACCCC
GAGTTCCCCG CCACCGATGT GGTGTTGGTG CTGGGGGCAA ATGATGTGGT CAATCCCCAG
GCCAAGAGCG ACCCCAATTC GCCGCTCTAC GGCATGCCCG TTCTGGATGT GCAGGACGCC
CGCACGGTGT TCGTGGTGAA ACGGGGCATG AGCGCTGGTT ACTCCGGCAT CAAGAACGAT
CTGTTCGAGC TAGCCAACAC CTCAATGCTG TTTGGTGATG CCAAGAAGGT GCTGGGCGAT
CTCCTGGTGG AACTGAAGGA TCTGGGCCTG GGCAAGAAGT GA
|
|---|
| Protein sequence | MSDFLKYAIE LVAVLLLALG IKGLSKVRSA RGANQLAAVA MGLAVLGLLI NYLGTSGISI
AAWTWIISGT LVGGVLGAIT AQRVPMTSMP ETVALFNGCG GMSSLLVALA AALYPAALDA
AGPVAVVSIV VSVFVGAITF TGSIVAMAKL QGWLSTPAWM QSKARHAVNI ALAVASLVGA
VEMLRNADSS TGLWLLVAAS GLLGIGVTLP IGGADMPVVI SLLNSYSGVA AAAAGFVVGS
QLLIVAGAMV GAAGLILTQV MCNGMNRSLV SVLFGGALGA TSAAGGGGGE YTNITSCSVE
ECALTLEAAE RVVIVPGYGL AVAQAQHTLR EVTRVLESAG IDVAYAIHPV AGRMPGHMNV
LLAEADVPYE QLQEMDQINP EFPATDVVLV LGANDVVNPQ AKSDPNSPLY GMPVLDVQDA
RTVFVVKRGM SAGYSGIKND LFELANTSML FGDAKKVLGD LLVELKDLGL GKK
|
|---|
| |