| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1877 |
|---|
| Symbol | |
|---|
| ID | 3735511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1706233 |
|---|
| End bp | 1707138 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637776462 |
|---|
| Product | nucleotide sugar epimerase |
|---|
| Protein accession | YP_382175 |
|---|
| Protein GI | 78213396 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.964376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGAA CCCGCTTCGT GGGCCGGCCC CTGGTGGCCC GCCTGCAGGC CCAGGGCCAT
GCACTCACCC TGTTCACCCG CGGCAAGAAC CCCGTCCCCA CCGGCGTGGA ACACCTCTGT
GGAGACCGCA GCAGCGATGA AGGCCTCAGC GCGCTGCAGG GCCGCAGCTT CGATGTGATC
GTCGACAGCT CCGGACGCAA GCAGGAGGAC AGCAGCCGCG TGGTGGCCAT CACCGGGGGC
CCCAGCCATC GCTTTGTGTA TGTGAGTTCA GCTGGGGTGT ACGCCGATTC AGAGCAGTGG
CCCCTGGATG AATCCAGCCC CACCAATCCG CAGAGCCGTC ACGCCGGCAA GGCCGAAACC
GAAGCCTGGC TGCGCAAGGA AGGCATCCCC TTCACCAGCT TCCGGCCCAC GTACATCTAT
GGCCCAGGCA ACTACAACCC TGTGGAACGC TGGTTCTTCG ATCGCATCGT TCACAGCCGC
CCGATTCCGC TGCCCGGTGA CGGCAGCACG ATCACCCAAC TGGGGCATGT GGAGGATCTG
GCCGAAGCGA TGGCCCGTTG CATCGAAGTG GATGCTGCAG CCAACCGGAT CTACAACTGC
TCCGGCAAAC AGGGCATCAG CTTCCGGGGC CTGATCCGCG CCGCAGCCGT GGCCTGCGGA
CGCGATCCCG ATGGCCTCGA GCTGCGCAGT TTCAACCCCA GCGATCTGGA CCCCAAGGCC
CGCAAGGCCT TCCCACTGCG GCTCAATCAC TTCCTTACCG ACATCACCCG GGTGGAACGC
GAACTGGCCT GGCAACCCAG CTTCGACCTG GCCAAGGGCC TGGCCGACAG CTACAGCAAC
GACTACGCCC TGAACCCAAC CGCAGCGCCA GACTTCAGTT CTGATGAGGC GCTGATCGGG
GCGTGA
|
|---|
| Protein sequence | MGGTRFVGRP LVARLQAQGH ALTLFTRGKN PVPTGVEHLC GDRSSDEGLS ALQGRSFDVI
VDSSGRKQED SSRVVAITGG PSHRFVYVSS AGVYADSEQW PLDESSPTNP QSRHAGKAET
EAWLRKEGIP FTSFRPTYIY GPGNYNPVER WFFDRIVHSR PIPLPGDGST ITQLGHVEDL
AEAMARCIEV DAAANRIYNC SGKQGISFRG LIRAAAVACG RDPDGLELRS FNPSDLDPKA
RKAFPLRLNH FLTDITRVER ELAWQPSFDL AKGLADSYSN DYALNPTAAP DFSSDEALIG
A
|
|---|
| |