Gene Syncc9605_1809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1809 
Symbol 
ID3737142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1646318 
End bp1647379 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID637776395 
Productextracellular solute-binding protein 
Protein accessionYP_382109 
Protein GI78213330 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGAA CCAGTTCTCG TGTTCTGATC GTTGCGTTGG CCGGGTTGTC CTCGTTTCTT 
GCATCCTGCG CGTCACTGGA CAGCGCAGCT GGCTCTCGTC TCGATCTGGT CAAGGCGCGC
GGCGAGTTGC TTTGCGGAGT GAGCGGCAAG ATCCCAGGCT TCAGTTTTCT CAATCCTGAT
GGGCGTTACA CCGGCCTGGA TGTCGACATC TGCCGTGCCA TGGCTGCGGC TTTCGTTGGT
GATGCTGAGA AGGTTCAATA CCGGCCTTTA ACCGCGCCCG AGCGGTTCAC GGCCCTGCGA
TCGGGCGAGA TCGATCTGTT GTCCCGCAAC ACCACCCACA CCCTCAGCCG CGATGCAATG
GGGGGCAATG GACTGCGCTT CGGGCCTGTG GTGTTCCACG ACGGACAGGG CCTGATGGTG
AATGCTGCCA GCGGAGTGCG CTCACTGGCG GATTTAAGCG GCAAGTCCAT TTGCGTGGGC
TCGGGCACCA CGACCGAGCA AAACCTCAAC GACGCCTTCG CCTCCCAGGG GCTTCCATAC
ACACCGATCA AGTATCAGGA TCTCAATCAG GTGGTGGGCG GCTACCTCCA GGGGCGCTGC
GAAGCTATGA CATCTGATCG TTCGCAACTG GCGGCGGCGC GCTCAGGGTT CAGTGATCCC
CAAGCGCATC AGATCCTTGA TGACCGGATC AGCAAAGAGC CTCTGGCTCC AGCTGTGGTG
GGGGGGGACC AGCCCATGGG TGATGCCATG ACCTGGGTGG TCAACGCCCT GATCGAAGCC
GAGGAACGGG GCATCACCCA AGCGAATGTG GATGCGGTGG TGAAGCAAGC CGCAGCCGAT
CCCTCCCAGA CCTCGCTGCG GCGTTTCCTG GGTGTGGATC CAGGCCTGGG TCGCAAACTC
GGACTCGCCG ATGACTTTGT CGTTCAGGTG ATCCGTGCTA CCGGCAACTA TGGCGAGATC
TACAACCGTC ATCTCGGACT GGACAGTGCC GTGGCGATTC CCCGGGGAGC GAACCGCCTG
GCCGGTGAAG GTGGTTTGAT GATTTCCCCA CCGTTCACTT GA
 
Protein sequence
MFRTSSRVLI VALAGLSSFL ASCASLDSAA GSRLDLVKAR GELLCGVSGK IPGFSFLNPD 
GRYTGLDVDI CRAMAAAFVG DAEKVQYRPL TAPERFTALR SGEIDLLSRN TTHTLSRDAM
GGNGLRFGPV VFHDGQGLMV NAASGVRSLA DLSGKSICVG SGTTTEQNLN DAFASQGLPY
TPIKYQDLNQ VVGGYLQGRC EAMTSDRSQL AAARSGFSDP QAHQILDDRI SKEPLAPAVV
GGDQPMGDAM TWVVNALIEA EERGITQANV DAVVKQAAAD PSQTSLRRFL GVDPGLGRKL
GLADDFVVQV IRATGNYGEI YNRHLGLDSA VAIPRGANRL AGEGGLMISP PFT