Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1700 |
Symbol | |
ID | 3737204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1556112 |
End bp | 1557986 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637776290 |
Product | hypothetical protein |
Protein accession | YP_382004 |
Protein GI | 78213225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.132674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00454875 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGATTCAGC CGATGGTTGG TTCATCGAGA GGAGACGACC CTCCACCGCT TTTCAAAGCA ATGCCCCCTA AGACAAATTC AATACTTCAA TCGATTGAGG ATCGCATGAA TGCCTCAAGC AAAGATTCCA ATAGCAGAAG TAATCAGAGT TCTGCATCTA AGCATGACTA CAGCACTGGT TCTAGGCGTG ACTTCATGCT GAATGGTGAA GATGGGGAGT CATATTCGGA GTACAAGCAA AGAGTCTCAA ATGTCCGAGA ATTTGAAGCT ATTCACATCC AGGGCCAAGT AAATACAGAC GAAAACAACA CTGAAACCCA GGAGCCAAGC TCATTTGCGT TTAAAACCCC TTCGGCATGG AATGTATTTG AAAACACATT GGTATGCGCA CTGGGTAGTG CTATGGGTGG ATGGGTTTTT AACAGAGTTA AGACTAATTC GCAGATAAGT ATTTGGCTTG ATGAGGGGCT CGATTTGTAT AGCACTAAAT CGGAAGCGAC CGTATCAAAT GCTTTAAGCG AAGCAATTGA GGAGTACAGG GAAAATCATG ACAGCAATGC AGGTGAAAAT GCAGTTAAAA ATGGAGTTTC AACAATTATT GGTGAGACTG TTAAAGGTAT ATTAAGGCTC GGTGAGGCTG CTGGGACGGC TACAGCTTGC CTTGTTGGAG GAGCCGCCCT TGAGGTTATA AACATAACTC CAGATCCGCC AATGATCGAT CGGGTTAATT TAAAACTTAG GCAGCTTGGG CAAATAGAAA TTAGGGAAAC GGTGCATGAT CAGCTGGCTG CCCGCAGAAG CTCAGGCGGT AGCCAAAGCA ACAGGTGGGA TGGAGGTGTT AATGACAGCA CCCCCTCTGG CAGTCGCTCA CAAGATTCAG CTGGGCATAC AACTGGTTCT AGTGGTCATC AAAATGGCAA TCAGAACACC GCAAACCCTA TTGGGTACGG ATACAACACA CAGCAAGGTA ATACCAATTC AAATCCCGAC AGCACTCCAC CAGGCGGCAG CACTCCGCCA AGTGGTGGAA CTCCGCCAAG TGGTGGAACT CCTCCAAGTG GTGGAACTCC GCCAAGTGGT GGAACTCCGC CATCCGATGA TGATGATGGG AATGATTACA ACGCCAGGCA TGCTGCAGAG TGTGCAAAAA AGAACCAAGA CTATGCAGGC TCAACAGACA ACGGTTACTT CTGCACAGTT CGAGAAGATA ATCCAAACCC AGAAGATGAT GGAACCCAGG GTGGAACTAG TAAGCCTTCT GTTGGTCCCG CACCCGGAGA TATAGGCGGT AGATATTCAG GCCTTATGAA TCCAGGTTCT GAAAGAGGCG GTCGTCCTTC TCCTGATGAT GACAATGGTG ATGGTCCTTT CGACGACAGG AGTTCATCAG GCGGCCGTGG TGGCAGAGGC TCCTCTGGTC CTGGTTCTGA TAGGTCAAAT GCAGATGATG ACTATGGGTG TGATCCTCTG ACTGGTGGTG GTCTTGGTGG AGGTGGAACT CAGGATGAAG TCGGCTGGAA TTTCTACAGG AGGCCACCTA AAAAAGGCGG CGGTGGTCAG TACGGAGATT CTGGTACTGG TTTTGATGAT CTCTACAAGC CAAATCCAGA AGATGACTAC GGCGTAGGTG GTCCTACTGC TCGCCTTTGG AATAGCACTG AAAGTGTTGA CGCCTTGGTT GCAGGTCAAT CTTCAGGAAC ATACATAGAG GTGCCTCCCG AGCCAGCATT CGCTTCCTTT GGGGCTTCGT TTGACTCATT CACCCCATCC AAGGATGTGT TTGGTGCAGG GTTTGAGGTG GCATCTGATT TGCAGTCAGC CAATTCGTTC GCTCCTGCCA AAGCTGACTT CACCAATGAG TTGGCAATGG TCTGA
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Protein sequence | MIQPMVGSSR GDDPPPLFKA MPPKTNSILQ SIEDRMNASS KDSNSRSNQS SASKHDYSTG SRRDFMLNGE DGESYSEYKQ RVSNVREFEA IHIQGQVNTD ENNTETQEPS SFAFKTPSAW NVFENTLVCA LGSAMGGWVF NRVKTNSQIS IWLDEGLDLY STKSEATVSN ALSEAIEEYR ENHDSNAGEN AVKNGVSTII GETVKGILRL GEAAGTATAC LVGGAALEVI NITPDPPMID RVNLKLRQLG QIEIRETVHD QLAARRSSGG SQSNRWDGGV NDSTPSGSRS QDSAGHTTGS SGHQNGNQNT ANPIGYGYNT QQGNTNSNPD STPPGGSTPP SGGTPPSGGT PPSGGTPPSG GTPPSDDDDG NDYNARHAAE CAKKNQDYAG STDNGYFCTV REDNPNPEDD GTQGGTSKPS VGPAPGDIGG RYSGLMNPGS ERGGRPSPDD DNGDGPFDDR SSSGGRGGRG SSGPGSDRSN ADDDYGCDPL TGGGLGGGGT QDEVGWNFYR RPPKKGGGGQ YGDSGTGFDD LYKPNPEDDY GVGGPTARLW NSTESVDALV AGQSSGTYIE VPPEPAFASF GASFDSFTPS KDVFGAGFEV ASDLQSANSF APAKADFTNE LAMV
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