| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1689 |
|---|
| Symbol | |
|---|
| ID | 3737192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 1547226 |
|---|
| End bp | 1548392 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637776278 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_381993 |
|---|
| Protein GI | 78213214 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.152729 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCAG CAAACGTGGC TGAGGTTGAT CTCGCCGTTA TCGGTGCAGG ACTGGCTGGC
TGCAGCATGA TTTGCCGGCT CCAGCAGCTG GGATCGAATC TCAACATCTC TTTGATTGAG
GCTGGCCGGG GGCCAGGTGG GCGCACGGCC ACCCGCCGGA GACGCGACCA AAGCGGCTGG
CTGCTCAACC ATGGAGCACC GGGGTTTGGC CTGAGTGAAT CCAAGTCGGA GGGAATGGAG
GCTCTGCTTG CGCCGTTGCG CTCGGCGGGT GTTCTTCAGC GTGACGAGCG AGCTGTGCTT
TCTCTCAACG CCCAAGGGGA TTTGTCTCCG GCCAACAGCC CTGAAGCCTG TCCGGTCGGT
GGCTGGTGGC ATGGGCTTCC CAGCATGGCC AGCATCTGCG AGGCGCTGCT CGATGCAGCT
GACTCAGTGC AACTGAGCCG CCAATTTGAA ACCCGCGTTC GCTGGCTGGA GCGACGCCAG
GGTCACTGGC TGCTGGAAAA CGAGGATCGA ACCTGGAGTC TCAGGGCCAA GCGCCTTGTG
CTCAGTGGAA CGCTGCTGGC CCATCCCCGA TCACTGAAGA TGCTGGCCTG GAACGACGTC
CCCCTGCGCT CAGCTGTTGC AGAGGGCGGT GACGTTGGCC TCGATGCGGT GCTGAGCCAG
CTGGAACGCA GCCAGGCCGA GGTGCGCTGG AACCTGATGG TGGACCTGGG GGTGCTCGCG
CTCAACGGTG GACAGCTCCC GGCTCAGATC TGGTTGGACA ACGACGCCAA AGAACGATGG
AAGGTTGAAC GCCTCGTGCT GCAGCCGCAA AGCGATGGTC GCTGGGGACT TGTGGTGCAT
GGCTTGGATT CCGGGGAAGC GATCACACCC GAAAGCCAGG GGCGTCTGAT GGCTCAGGAG
CAACAGCGCC TGTTGCAGCT GTTGCCCGAA CTGATGCAGG GCCTGCCGGT TGTTTCAGCG
GCGTTGCAGC AGGCGACACC GTTGGGGGTG ATGCGCTGGG GCGCCTCACG GCCCCTCAAC
CACCCGCTGC CAGAAGAGCT GCAATGGTGC CCCACCAGCG CCGTGGGATT CTGCGGCGAC
TGCATCGAAG GGCCTGGCTT CGGGAGAGCA GAGGGAGCAA TCAGCAGCGC CGTCAACCTG
GCTGAACGTC TGCACGTCGA CCGCTAA
|
|---|
| Protein sequence | MASANVAEVD LAVIGAGLAG CSMICRLQQL GSNLNISLIE AGRGPGGRTA TRRRRDQSGW
LLNHGAPGFG LSESKSEGME ALLAPLRSAG VLQRDERAVL SLNAQGDLSP ANSPEACPVG
GWWHGLPSMA SICEALLDAA DSVQLSRQFE TRVRWLERRQ GHWLLENEDR TWSLRAKRLV
LSGTLLAHPR SLKMLAWNDV PLRSAVAEGG DVGLDAVLSQ LERSQAEVRW NLMVDLGVLA
LNGGQLPAQI WLDNDAKERW KVERLVLQPQ SDGRWGLVVH GLDSGEAITP ESQGRLMAQE
QQRLLQLLPE LMQGLPVVSA ALQQATPLGV MRWGASRPLN HPLPEELQWC PTSAVGFCGD
CIEGPGFGRA EGAISSAVNL AERLHVDR
|
|---|
| |