Gene Syncc9605_1584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1584 
Symbol 
ID3736881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1453244 
End bp1453753 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content45% 
IMG OID637776172 
Productflavodoxin FldA 
Protein accessionYP_381888 
Protein GI78213109 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.914641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00800437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTTTCA CTATTTTCTT TGCCACATCT ACTGGTAAAA CTGAGGATGT GGCTGATCGA 
CTCAAGGAGC TTCTTCCTGG AACAGAAGCG AAGGATGTTG ACAACATCGA TTCAATTGAT
GAGTTGGTTG CAGCTGAGTC GTTAATTTGT TGTGTTCCAA CCTGGAATAC AGGCGCTGAT
GAAGCACGGT CAGGAACAGC CTGGGATGAT CTGGTTCAGG AAATTCCTGA CAAGGATTTT
GCCGGTAAAT CAGTCGCAAT CGTAGGTCTT GGTGACTCCT CCGGTTATTC GGATTTTTTC
TGTGATGCCA TGGAGGAACT GTATACGGCT TTTCTTCAAT CTGGTGCCAA GTTGATTGGT
AAGGTTTCCA CAGAAGGGTA TACCTATGAT GACTCAAAGA GCATTATTGA TGGTAAGTTC
TGCGGACTTG CAATCGATGA AGACAATGAG TCGGAATTGA CAGATCATCG TTTGCAGGCC
TGGGTTCAGC AAATAAACGC TGAGGCCTGA
 
Protein sequence
MTFTIFFATS TGKTEDVADR LKELLPGTEA KDVDNIDSID ELVAAESLIC CVPTWNTGAD 
EARSGTAWDD LVQEIPDKDF AGKSVAIVGL GDSSGYSDFF CDAMEELYTA FLQSGAKLIG
KVSTEGYTYD DSKSIIDGKF CGLAIDEDNE SELTDHRLQA WVQQINAEA