| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1543 |
|---|
| Symbol | |
|---|
| ID | 3736989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1418617 |
|---|
| End bp | 1420005 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637776131 |
|---|
| Product | nucleotide binding protein, PINc |
|---|
| Protein accession | YP_381847 |
|---|
| Protein GI | 78213068 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1875] Predicted ATPase related to phosphate starvation-inducible protein PhoH |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.107982 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.828891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA AAATTGTTGT TCTCGACACG AATGTGCTGC TCCATGATCC TGAGGCGCCG
CACCGCTTTG GTGATCTCAG GGTTGTGATC CCCATCCAAG TGGTTGAAGA AATCGATCGC
TTCAAAAAGG ATCACTCTGA AAAAGGCCGC AACGCTCGGC GGATTTCAAG GCTCCTGGAT
TCCTACCGAG CCCGCGGAAG CCTTGCCGAT GGCGTTCCGA TTGAGGGCAC GAATCACGGC
ATCCTGCAGG TGGTGTTCTG TCAGGCCCAA GCTCTCAACG CCTTGCCGGC AGAACTGCAG
GGGGGAGGCG GCGACAACAA CATCCTTGCG GTGGCCCTCG AGCAGATGCG ATGCAGCGGG
CTGACGAAGG CACCTGAGGT TGTGCTGATC AGCAAAGACA TCAACCTGCG AATCAAGGCT
GATGCGGTGG GCCTGCAGGC CGAGGACTAC GTCAACGACA ACGTCTCGAT CGACGATCTC
TACGCAGGGT TCCGACAACT CAGCACCGAT GCGGAGACGA TCAAGACCCT GCATGACGAG
GATCAACTCC CTTTGGAAGC TGTCGCCGAT CCCGAGGGGC AGCATCTCCA GGCCAATGAA
GGTGTGGTGC TGGTGGATCA GCACAACGAC AGCCACACCC TGCTTGCCCG GCATCAAGGC
AACAGCAACA TCATCAAGCC GCTGCACTGG CTGAAACGCG CCCACCTGGG ACGGATCAAG
GCGAGAAATC GCGAGCAAAG CTTTGCGCTG GATCTGCTGC TCGATCCCTC GGTCGCTCTG
GTGACCTTGG TGGGCAAGGC CGGCACAGGC AAAACGTTGC TGGCCATCGC CGCAGGTTTG
CACCAGGTGG CCGACACCCA TCACTACGCC CGCCTGTTGG TGACGCGCCC ACCGATTTCC
CTCGGCAAAG ACATCGGCTA CCTGCCGGGC ACGCTTGAGG AGAAACTCGG CCCTTGGACG
AAGCCGATCA TCGACAACAT CGACTTCATC ACAGGTTCGT CTCCCGGCGG GGAGGCTGAG
CAGACGAAGA AACAACGGCA CTGCGAACCA CGCAACGCCT GGGCTGACTT GCAAGGCATG
GGCTTGCTTG AGGTTGAAGC GATCAACACC ATCCGCGGCC GATCGATTCC CAATCAGTTC
CTGGTGGTGG ATGAGGCGCA AAACCTCACG CCCCTGGAAG TGAAGACGAT CGTGACGCGG
GTGGGGGAAG GAACCAAGGT TGTCTTCACC GGTGACCCTT ATCAAATCGA CAATCCCTAT
GTGGATGCCG AAAGCAACGG GCTCACCTGG CTGGTGGAAA AGCTCAAAGG TCAGCCCCTG
GTGGGACACA TGACCCTCAC CAAAGGTGAG CGCAGTGAAC TGGCTGAACT GGCGGCCAAC
ACCCTCTGA
|
|---|
| Protein sequence | MKDKIVVLDT NVLLHDPEAP HRFGDLRVVI PIQVVEEIDR FKKDHSEKGR NARRISRLLD
SYRARGSLAD GVPIEGTNHG ILQVVFCQAQ ALNALPAELQ GGGGDNNILA VALEQMRCSG
LTKAPEVVLI SKDINLRIKA DAVGLQAEDY VNDNVSIDDL YAGFRQLSTD AETIKTLHDE
DQLPLEAVAD PEGQHLQANE GVVLVDQHND SHTLLARHQG NSNIIKPLHW LKRAHLGRIK
ARNREQSFAL DLLLDPSVAL VTLVGKAGTG KTLLAIAAGL HQVADTHHYA RLLVTRPPIS
LGKDIGYLPG TLEEKLGPWT KPIIDNIDFI TGSSPGGEAE QTKKQRHCEP RNAWADLQGM
GLLEVEAINT IRGRSIPNQF LVVDEAQNLT PLEVKTIVTR VGEGTKVVFT GDPYQIDNPY
VDAESNGLTW LVEKLKGQPL VGHMTLTKGE RSELAELAAN TL
|
|---|
| |