Gene Syncc9605_1516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1516 
Symbol 
ID3735495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1403497 
End bp1405170 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content64% 
IMG OID637776104 
Producthypothetical protein 
Protein accessionYP_381820 
Protein GI78213041 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0533389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG CCACGTTTGC TGAGTTCGCC GAACGGGCCG ACTACTCCCT TCTGGAAGCC 
CTCACGCCTG ACCCGGAGTC CACGGCGGAT GGGAAGGACC ACCGTCCCCG CCAGGTGCTC
TCTGGCCACT ACGTGCCGGT GACGCCAACC CCGATTCCCG AGCCCCAATA CTTGGCGCAC
AGCCGCAGCT TGTTCAGCGA GCTGGGTCTC AGCAACGACC TGGCTCAGGA CGATCAGTTC
TGCCGGATGT TCTCCGGTGA TCTCGGTGTG GCCACTGGTC CGATGCGGCC CTGGGGCTGG
GCCACCGGCT ATGCCCTTTC GATCTACGGC ACCGAATACA CGCAGCAGTG TCCCTTCGGT
AATGGCAACG GCTACGGCGA TGGTCGAGCC ATGTCGGTGT TTGAGGGGGT GTTTGAAGGT
CGCCGCTGGG AGATGCAGCT CAAAGGTGGC GGTCAGACCC CCTACTGCCG TGGTGCCGAC
GGCCGAGCCG TGCTGCGCTC CAGCGTGCGT GAATTTCTGG CGCAGGAGTT CATGCACGCC
CTCGGTGTGC CCACCTCCCG CTCGTTGACG CTGTACGTCT CCCACGCCGA GTCGGTGCGA
CGGCCCTGGT ATTCCGAGAA CTCACGCTCG ATGGATCCGG ACGTGATGGT CGATTGCCCG
GCCGCTATCA GCACCAGGGT GGCGCCCTCA TTTCTGCGGG TGGGTCAGCT GGAGTTGTTC
GCACGCCGTG CCCGCAGTGA GGCCCATCCC CGGGCACACC AGGAGCTGCA CCTGATCGTG
GCGCACCTGA TCGAACGCAA CTACCGCCAG GAGATCGATC CCGGCCTTCC ATTCAGCGAC
CAGGTTGTGC TGTTGGCGCG CTTGTTCCGT GATCGGCTCA CGGCCCTCGT GGCCAACTGG
ATCCGTGTGG GCTACTGCCA GGGCAACTTC AACAGCGACA ACTGCGCCGC CGGTGGCTTC
ACCCTCGACT ACGGCCCGTT CGGCTTTTGC GAGCTGTTTG ATCCGCGTTT TCAGCCCTGG
ACCGGTGGTG GCGCCCACTT CTGCTTCTTC AACCAGCCGG CGGCTGCGGA GGCCAACTAC
CGCATGTTCT GGAAATCCCT GCGCACGCTG ATGGAGGGCC AGGCGCAGGC CCAGGCCCAA
CTGGATCAGT TGCTGGAGGA TTTCCCCGCT GCCATGCAGG AGACCATGCA ACGGATGTGG
AGCAGCAAAC TTGGCCTGCC CAGTGCCGAT GACACCCTGG TGCAAGAGCT GTTGAAGCTC
CTGGTGGAGT CGAGCGCCGA TTACTCGATG TTCTTCCGCC GTTTGTCGGA TCTGCCCGAG
CAGATCGATC CGCTGCGGGA CTGTTTCTAT CTGCCCCTGT CGGCCCCCCT TGAATCCCAA
TGGAACGACT GGTTGCTGCG CTGGCGTGCC CAGTGGCCCA GTGGCGTTGA ACCATCTGTG
ATCTCCGCTG GGATGCGGCG GGTCAACCCG GCGATCACCT GGCGCGAATG GTTGATCGCT
CCGGCCTACC AGCAGGCCGC CGAAGGCGAC ACTTCCCTGA TGACTGAACT GCAGCAGCTG
TTCAGCACCC CCTATGAGAC TCCGTCCCCC GACATGGCGG CCCGCTACGA CCGCTTGAAA
CCGCGGGAGT TCTTCAGCGC CGGTGGGGTG TCCCACTACA GCTGTTCCTC TTGA
 
Protein sequence
MSTATFAEFA ERADYSLLEA LTPDPESTAD GKDHRPRQVL SGHYVPVTPT PIPEPQYLAH 
SRSLFSELGL SNDLAQDDQF CRMFSGDLGV ATGPMRPWGW ATGYALSIYG TEYTQQCPFG
NGNGYGDGRA MSVFEGVFEG RRWEMQLKGG GQTPYCRGAD GRAVLRSSVR EFLAQEFMHA
LGVPTSRSLT LYVSHAESVR RPWYSENSRS MDPDVMVDCP AAISTRVAPS FLRVGQLELF
ARRARSEAHP RAHQELHLIV AHLIERNYRQ EIDPGLPFSD QVVLLARLFR DRLTALVANW
IRVGYCQGNF NSDNCAAGGF TLDYGPFGFC ELFDPRFQPW TGGGAHFCFF NQPAAAEANY
RMFWKSLRTL MEGQAQAQAQ LDQLLEDFPA AMQETMQRMW SSKLGLPSAD DTLVQELLKL
LVESSADYSM FFRRLSDLPE QIDPLRDCFY LPLSAPLESQ WNDWLLRWRA QWPSGVEPSV
ISAGMRRVNP AITWREWLIA PAYQQAAEGD TSLMTELQQL FSTPYETPSP DMAARYDRLK
PREFFSAGGV SHYSCSS