Gene Syncc9605_1407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1407 
Symbol 
ID3737126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1321618 
End bp1323108 
Gene Length1491 bp 
Protein Length496 aa 
Translation table11 
GC content54% 
IMG OID637776000 
Productglucosylglycerol-phosphate synthase 
Protein accessionYP_381716 
Protein GI78212937 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0380] Trehalose-6-phosphate synthase 
TIGRFAM ID[TIGR02398] glucosylglycerol-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGG GTCAGAGTTC GTTTGTAATC CTCTACCACC GCACACCGTT CGACGAATCA 
AAAGACAAGA ACGGCAAAAG AATATGGGTC GATCAGAAAA GCCCTAACGG AATTATTCCA
ACCCTTCGCA ATCTTTTCCG CAGCTGCGAA AAGGGCACCT GGATTGCCTG GAGAAGAGTC
AACGATCAGT CGAATGAGGG CACAGAACGG TTTGAGATGG ATAACCCTTC TCCGTTCACT
CTTTGCAGAA TCCCCCTGGA AGATGAACAG ATCTCCAGTT TTTATCACAT CACATCCAAA
GAATGCTTCT GGCCAATTCT TCATACATTC CCGACATATT TTAATGTTAA CAATGCGAAC
TGGAAGATCT TTGAAGAGGT CAACAAACGT TTCGCCATGG CGGCATGCGC CGAAGCTGCC
GAAGGTGCAA CGGTGTGGGT TCATGACTAC AACCTTTGGT TGGCTCCTGG ATACATCCGA
GCCGAACGTC CAGACCTGAA GATCGCCTTT TTCCATCACA CTCCTTTCCC GGGTAATGAT
GTTTTCGCCA TCCTTCCCTG GCGTGAGCAG ATTCTGGAAA GTCTGCTTTG TTGTGACGTC
GTCGGCTTTC ATATTCCCCG CTACACGGAA AACTTTGCCC GTGCCGCCAC AACCCTTGTG
GGTGCCAAAC GTGGACCCAA AGTGCCGGTG GACGAAAAGT TCATTGAGGT CGGCACTGCC
CTGTCGGAAG GCACGGTCAC CAGTCACCTC GAGCACAACG GCCGCACGAT TCAGCTGCTC
AGCTCTCCGG TGGGCACCTC ACCGGATCTT ATTCAGGAGT TGTGCTGGAG CCCGTCGGTT
GAAAGCCATG GCGAATTGAT CGTTCAAGAC ACCAAAAAAG GTCGAAAATT GATCCTCTCC
GCCAGTCGAG TGGATTACAC CAAAGGGAAC GAAGAGTTAC TGCTGGCCTT TGAACGGCTG
TTGGAACGAC GCAAAGATCT GCACGGACAA GTGGTGTTGA TGCTGGCCTG TGTGGCCGCC
GCCAGTGGAA TGAAGATCTA CGAAGACACC CAACGCTCGA TCGAGGAAAT GGCCGGTCGA
ATCAACGGCC GCTTCAGCCA GATCGATTGG GTGCCCATCC GCTTTTCCAC CCGTCGGATC
CCCTACGACG AAATGATCGC CTGGTTCTGC CATGCAGACG TGTGCTGGAT CACGCCGCTG
CGGGATGGCC TGAATCTGGT GGCCAAGGAA TATGCCGCTG CTCGACGCAA CCGTGGCGGC
GTTCTCGTGC TCTCAGAATT CACCGGAGCC TCGGTTGTGC TCGATGGTGC CGTGCTCACC
AACCCGTATT CGAATCGCCG CATGGACGAG GCCATTGAAT CGGCACTGGA AATGGATGAA
GACGAACAAC GGGACCGAAT GAGCCGCATG ACCGATGCTG TTGAGAGCTA CACCGTCAGC
GACTGGGCGG ATGAACAGAT GTCTGGTCTG TCGCCCTCGA CCCCGCAATG A
 
Protein sequence
MGAGQSSFVI LYHRTPFDES KDKNGKRIWV DQKSPNGIIP TLRNLFRSCE KGTWIAWRRV 
NDQSNEGTER FEMDNPSPFT LCRIPLEDEQ ISSFYHITSK ECFWPILHTF PTYFNVNNAN
WKIFEEVNKR FAMAACAEAA EGATVWVHDY NLWLAPGYIR AERPDLKIAF FHHTPFPGND
VFAILPWREQ ILESLLCCDV VGFHIPRYTE NFARAATTLV GAKRGPKVPV DEKFIEVGTA
LSEGTVTSHL EHNGRTIQLL SSPVGTSPDL IQELCWSPSV ESHGELIVQD TKKGRKLILS
ASRVDYTKGN EELLLAFERL LERRKDLHGQ VVLMLACVAA ASGMKIYEDT QRSIEEMAGR
INGRFSQIDW VPIRFSTRRI PYDEMIAWFC HADVCWITPL RDGLNLVAKE YAAARRNRGG
VLVLSEFTGA SVVLDGAVLT NPYSNRRMDE AIESALEMDE DEQRDRMSRM TDAVESYTVS
DWADEQMSGL SPSTPQ