| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1381 |
|---|
| Symbol | pgi |
|---|
| ID | 3735936 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1297577 |
|---|
| End bp | 1299235 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637775973 |
|---|
| Product | glucose-6-phosphate isomerase |
|---|
| Protein accession | YP_381690 |
|---|
| Protein GI | 78212911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.142127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.933656 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCGTGGGC ATCACGCCAG ATCCTGGATA CGTTCGGCAA GACTGCAACG CCCGCCCGGC
ATGAGCTTCC CGGATTTCAG CGCCTCCGAC GCTCATATTC AGTGGCAGAG GTTCTGCGAT
CTCAGTTGGT ATCACGATGA TCTGGGCGTC TGGCTCGACA TCAGCCGGAT GCATGTGAAC
GCGAGCGACC TGCAGCAGCT GCAGCCTCGG ATGGACAAGG CCTTCGCTGC GATGCAGGAG
TTGGAAGCTG GCGCCATCGC CAATCCCGAT GAGCAGCGTC AGGTGGGTCA CTACTGGCTT
CGCACCCCCG AACTCGCCCC TTCCTCAGAG CTGCAGCAGC ACATCTCCAG GGAAATTGAC
CTGATCGCCG CCTTTGGGCG CGATGTGGTC AACGGAACGA TCAAGGCCCC CAACGGCGAA
GCCTTCACCG ATGTCCTTTG GATCGGCATT GGCGGCAGTG GTCTTGGTCC CGCTTTGATG
ATCAAGGCTC TGCAGAACCC GGGAGAGGGA CTTCCGTTCC ATTTCTTCGA CAACGTCGAT
CCCAATGGGA TGAGCAACGT CCTGGCGGGG TTGGAAGGTC GTCTAGACCG CACGCTGGTG
GTGACGGTGA GCAAGTCGGG GGGCACCCCT GAACCCCACC TCGGCATGGA GCAGGCTCGC
CATCGCCTCG AGGCCGCTGG TGGCCAGTGG GCCGGTCAGG CCGTTGCCGT GACGATGCTC
GACAGCAAGC TGGATCAGCA GGCCCAGAAG GAAGGTTGGC TCAAGCGTTT CGACATGTTC
GATTGGGTGG GAGGCCGCAC CAGCATCACC AGTGCCGTGG GTCTGCTGCC CGGGGCCTTG
ATTGGCTGCG ACATCCGCGA TTTTCTCAGC GGAGCATCTC AGATGGATGC TGCCACCCGC
ATGGCGGATC TTCGCCGCAA TCCAGCCGCT CTGATGGCCG CCTCCTGGCA TGTGGCCGGT
GGTGGTCGCG GTCAGCGCGA CATGGTTGTT CTGCCCTACC GCGATCGTCT GGAGGTGTTC
AGCCGTTACC TCCAGCAGCT GGTGATGGAA TCCCTGGGCA AGCGCCTGGA TCGCAACGGT
GACGTGGTTC ACCAGGGCAT TGCTGTTTAT GGCAACAAAG GCTCCACCGA CCAGCACGCC
TACGTGCAGC AACTGCGCGA CGGTGTCGAC AACTTCTTTG CCACCTTCAT CGAGGTGCTC
GAGGACGTGA GCGATATCCC TACGATTTCC GGGGAATGCC CAGGCGACTT CCTCGATGGT
TTCCTGCAGG GCACCCGCTC AGCCCTCACC GAGAGTGGGC GCCAGAGCAT GACGATCAGC
ATGCGCTGCT TTGATGCACG CCGTCTCGGT GCCTTGATCG CTCTGTTCGA GCGTGCCGTC
GGTCTCTACG GCGAACTGGT GAACATCAAC GCCTACCATC AGCCGGGTGT GGAAGCCGGT
AAAAAGGCAG CCGCTGCGAT TCTCAATCTC CAAGGTCGTG TGGAAGCAAT CCTGGCCGAC
GGTGTGGCCC GCTCCGCCGA TGAGATCCGC CTGGCCCTCG GCGATGGCAC CGACGAATCC
ATTTTCTGGA TCCTGCGCCA TCTCACCGGC AACCAGCGCG GCTTCAGTGC CCAGGGCGAC
TGGAGTCAGC CCGCCTCGAT GCGCTTTAGC AAAGGCTGA
|
|---|
| Protein sequence | MRGHHARSWI RSARLQRPPG MSFPDFSASD AHIQWQRFCD LSWYHDDLGV WLDISRMHVN
ASDLQQLQPR MDKAFAAMQE LEAGAIANPD EQRQVGHYWL RTPELAPSSE LQQHISREID
LIAAFGRDVV NGTIKAPNGE AFTDVLWIGI GGSGLGPALM IKALQNPGEG LPFHFFDNVD
PNGMSNVLAG LEGRLDRTLV VTVSKSGGTP EPHLGMEQAR HRLEAAGGQW AGQAVAVTML
DSKLDQQAQK EGWLKRFDMF DWVGGRTSIT SAVGLLPGAL IGCDIRDFLS GASQMDAATR
MADLRRNPAA LMAASWHVAG GGRGQRDMVV LPYRDRLEVF SRYLQQLVME SLGKRLDRNG
DVVHQGIAVY GNKGSTDQHA YVQQLRDGVD NFFATFIEVL EDVSDIPTIS GECPGDFLDG
FLQGTRSALT ESGRQSMTIS MRCFDARRLG ALIALFERAV GLYGELVNIN AYHQPGVEAG
KKAAAAILNL QGRVEAILAD GVARSADEIR LALGDGTDES IFWILRHLTG NQRGFSAQGD
WSQPASMRFS KG
|
|---|
| |