Gene Syncc9605_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1278 
Symbol 
ID3736022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1195003 
End bp1195683 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID637775868 
Producthypothetical protein 
Protein accessionYP_381587 
Protein GI78212808 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGC GGCGGCTGGA GCCTGAGTTG ATGAACGGCG ATGCACAGGT GCAGGCCTAC 
GCCGCTGCCG ACTTCAGTTC CGGCGATCAA GCCACCCTTG AGGCGATCCA GCAGCTCCTC
TTCACCACAT CACCGTTGCC GGCTGATCCA CTGGTGGTGG ATCTGGGTTG TGGGCCGGGA
AACATCACCC TTCAGCTGGC CGAACTCTTA CCGAACGCTC GGATCGTCGG CATCGACGGT
GCCGAATCGA TGCTGGCTCT GGCCCGGGAG CGAGCGCAGC AGCAGCAACT GGAGATCTCA
TTCCTCTGTC AGACCCTTCA GGAGGTTCTT CAAGGGCCTC TTCTTGGACA GGCCGATCTG
ATCGTCAGCA ACAGCCTGTT GCATCACCTG CACCAACCCG ATCTGCTCTG GACGGTTAGC
CGAGCTCTGG CAGCACCGGG GTGTCGCGTC TTGCATCGGG ATCTGCGGCG TCCGTTCTCC
GACGCTGAGA TTGAACAGCT GCGGCTCAAG CACCTTCCAT CGGCACCAGA GGTGTTGCAG
CACGACTTCG CTGCCTCGCT GGCGGCGGCC TTTGAGCCTC ATGAGGTGAC TGCCGAGCTC
CACAGGCTTG GTCTCAACCA GTTAGCCGTG TCGGCGGAGG ACGACCGTTA TCTGGTGGTG
TCAGGCTTGG TGAAGTCCTG A
 
Protein sequence
MMERRLEPEL MNGDAQVQAY AAADFSSGDQ ATLEAIQQLL FTTSPLPADP LVVDLGCGPG 
NITLQLAELL PNARIVGIDG AESMLALARE RAQQQQLEIS FLCQTLQEVL QGPLLGQADL
IVSNSLLHHL HQPDLLWTVS RALAAPGCRV LHRDLRRPFS DAEIEQLRLK HLPSAPEVLQ
HDFAASLAAA FEPHEVTAEL HRLGLNQLAV SAEDDRYLVV SGLVKS