Gene Syncc9605_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1269 
Symbol 
ID3736012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1187608 
End bp1188414 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content57% 
IMG OID637775859 
Productinner membrane protein 
Protein accessionYP_381579 
Protein GI78212800 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TGCGCCTCGA GCTGCTGCAC CGTCACCGGA TTCGAGACCC AGGCCTCGGC 
CTGAATGAAC CATCCGGGCT GACGTTGAAC GGAGATGGCT CAGCGCTCTA CACCGTCAGC
GATGACACCA AGGCGATTTT TCGTCTGGAT CTCAAAGGCA GAGTGTCGGT GAGGGACTCG
TTCTTCATCG GCCTCGACGA CTTGGAGGGC ATTGCAATCC GTGGCGATGA CAGCGAGCTG
CTCGTGGTGC AGGAGGGAAG CAATTCTTTG GTGGTGGTGG ATCTGAACAC CCGAAGGGAA
CGCTCTCGAT GCCCCCTGTC AGCCATGACC AACTACGACA CGATTGCGCA CCATTTCCCC
GACCCTCCTG ACAACAACGG CTTGGAGGGC ATCACTGTGA ACACCAGCAA CGACCATGTG
TTTGTGGTGA AAGAGCACCA GCCCGGTCTG CTGATTGAAC TGGATTCCTC GCTCACGACA
ATCATCTCCA CACGCGAGCT GCAGCCCAGC CAAGGGTTCA TCCACCCCGA ACTGAAGGCC
GAGAAGCTGG ATTTCTCGAG CCTGAGCTAC GACAGCAGCA GCGACACCCT CTGGATTGTG
AGCGACAAGG GCCGGTGCCT GTTCCAATAC GACTGGGCAC GCGACACTGT GCTTCAACGC
CTCGATCTCA CCATCAGCAC GGGAGACAAG CCAAAACGGA TCCGAAAACC GGAGGGTGTT
GCCTTCGATC CTGATCGAAA CAGGTTGTAC GTGGTGAGCG ATCGTGACGG GGATCTCTAT
GTGTTCAAGC TCCATGACGA CGGCTAA
 
Protein sequence
MTSMRLELLH RHRIRDPGLG LNEPSGLTLN GDGSALYTVS DDTKAIFRLD LKGRVSVRDS 
FFIGLDDLEG IAIRGDDSEL LVVQEGSNSL VVVDLNTRRE RSRCPLSAMT NYDTIAHHFP
DPPDNNGLEG ITVNTSNDHV FVVKEHQPGL LIELDSSLTT IISTRELQPS QGFIHPELKA
EKLDFSSLSY DSSSDTLWIV SDKGRCLFQY DWARDTVLQR LDLTISTGDK PKRIRKPEGV
AFDPDRNRLY VVSDRDGDLY VFKLHDDG