Gene Syncc9605_1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1195 
Symbol 
ID3735884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1117951 
End bp1118940 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content62% 
IMG OID637775785 
Producthypothetical protein 
Protein accessionYP_381505 
Protein GI78212726 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCG GCACGTTTCT TGTTGCACTC ACCTTGGTGG TGCTGGTGCT GTTGCTCTGG 
CACCTGCGTT GGGTGCTGCT GGTGCTCTTT GGCGCCGTTG TGGTGGCCGT AGCCCTGGAT
GTGCTGATTG CGCAGGTTCA GAAGCGAACC CCACTGAAGC GCCCCCAGGC CCTGGCGGCC
GTGCTGGGGA TTTTGATCTT GACCGGTGGA CTGCTGGGGC AGCTGCTGGT GCCGGAACTG
ATCAACCAGT TCCAGCAACT GGGTCGGGAT CTGCCGCAGT TGGTCAGCAA GGTGTCCGAC
CTGCTGAGCA ATGAGCCTCG CCTGGCGCAG CTAAATGACG CTGTGGGTGA GGGCCTCAAC
CTGAATGGAC TTCAGCCATT GCTGGGGTTC GCAGGAGGTG CAGCCAATTC GCTGGTTCAA
CTGTTCTTGA TGGTGCTGCT CGCGATCCTG CTGGCCTTGG ATCCAAACGC CCATCGGCGC
ATGGTGGTGG CCATGACCCC CCGACCTGCC CGGGAGCAGA TGGAACATCT GCTGGATGAA
TGCAGGCAAG CCTTGGGGGG GTGGCTCAGT GGCATGACCC TTTCCTCCAC CACCGTGTTT
CTGCTCACCT GGGGAGGCCT TATGCTGATT AAGGCACCCT TGGCCCTGTT GAGTGCCCTG
GTCTGTGGCC TGCTCACGTT CGTTCCGACC ATCGGGCCTA CGGCGGCAAC GCTGCTGCCC
GCGGGATTGG CCCTGCTGCA GTCGCCGCAA TTGATGCTGT CGGTTCTGGT GTTCCGGCTG
GTGCTGCAGA ACCTGGAGGC TTTTCTGCTC ACACCACTGC TGCTGCGCAA AACCGTGAAT
CTGCTGCCAA CAGTGGCTTT AACGGCCCAG CTCAGCCTTG GCGCTCTTCT CGGGCTTCCG
GGCGTGCTGC TGGCCCTTCC TTTGGTGGTG GTGCTTCAGG TGTTGATGCA GCGGGTGGTG
GTGCAGCAGA TCATGGACCG CTGGGCCTGA
 
Protein sequence
MTAGTFLVAL TLVVLVLLLW HLRWVLLVLF GAVVVAVALD VLIAQVQKRT PLKRPQALAA 
VLGILILTGG LLGQLLVPEL INQFQQLGRD LPQLVSKVSD LLSNEPRLAQ LNDAVGEGLN
LNGLQPLLGF AGGAANSLVQ LFLMVLLAIL LALDPNAHRR MVVAMTPRPA REQMEHLLDE
CRQALGGWLS GMTLSSTTVF LLTWGGLMLI KAPLALLSAL VCGLLTFVPT IGPTAATLLP
AGLALLQSPQ LMLSVLVFRL VLQNLEAFLL TPLLLRKTVN LLPTVALTAQ LSLGALLGLP
GVLLALPLVV VLQVLMQRVV VQQIMDRWA