Gene Syncc9605_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1016 
Symbol 
ID3735263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp963283 
End bp964302 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content62% 
IMG OID637775608 
Producthypothetical protein 
Protein accessionYP_381329 
Protein GI78212550 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGCA TCCTGTTGAC CGGCGCAAGC GGATGCGTCG GTCAGTACAT CTCCCGCTGG 
TTGCTGGACC ACTCCGATGC GGAGTTGCTG CTCTGGCTGA GAGACCAAGC CAAACTCACC
GCTGTTCCAG CAAACCATCC CCGCATCCGT CTTTTGGTGG GTGACCTTCG GGACACCGAC
CGTTTTGCCC ATGAGCTGGC CTCGGTGAAC CGGGTGATTC ACACCGCCAC GGCCTGGGGT
GATCCCGAGC GGGCCGAACA GGTGAATGTG GTTGCGGTGA AGCGGATGCT GGCGCTTCTG
GATCCCAGCA AGTTGGAGCA GATCATTTAT TTCTCAACGG CAAGCGTGCT CGATCGGCAC
CTGCGCCCCT TGCCTGAAGC TCTGGCCTAC GGCACGGAAT ACATCCAAAC CAAGGCTCGC
TGCCTCAGGG ATCTGGAGCA GCATCCCCTT GCCAGCAAAA TCGTCGCGGT GTTTCCAACC
CTGGTGTTCG GCGGAAGGGT CGATGGCACC AGCCCTTTCC CCACCAGCTA TCTCACCGAA
GGTTTGGCTG AAGCCAGCAA ATGGCTCTGG CTGGCCCGTT GGCTTCGGGT GGATGCGAGC
TTCCACTTCA TCCATGCGGA AGACATCGCC CGCCTCTGCG GTTTGTTGGC CACACGCCCC
CATGAACCGA ACCGTGAGCC CGGGCAAGGC GCCCTTCGCC GAGTGGTGAT GGGCCAACCG
GCCATCTCGG TGAACGACAC CGTGAAAACC CTCTGCCGCT GGCGTGGTGT GGCCCGAACG
CCCGGCATTC CGCTCTGGCC ATGGCTGATC GAGACCCTGA TCCGCGTTCT GCCGATCGAA
GTGAACGCCT GGGACCGATT CAGCATTCGA CAGCGCCACT TCATCCATGA CCCGGTGACG
CAGCCGCAAC GTTTCGGTGG CAGCAGCCAT GCCCCTGACT TGGCAACAGT TCTTAGCGAT
TCCGGCCTGC CCAATCGCGG AACCCCCAGA CCCGCGCGTA AGGTCAATGC ATCGACCTAG
 
Protein sequence
MTRILLTGAS GCVGQYISRW LLDHSDAELL LWLRDQAKLT AVPANHPRIR LLVGDLRDTD 
RFAHELASVN RVIHTATAWG DPERAEQVNV VAVKRMLALL DPSKLEQIIY FSTASVLDRH
LRPLPEALAY GTEYIQTKAR CLRDLEQHPL ASKIVAVFPT LVFGGRVDGT SPFPTSYLTE
GLAEASKWLW LARWLRVDAS FHFIHAEDIA RLCGLLATRP HEPNREPGQG ALRRVVMGQP
AISVNDTVKT LCRWRGVART PGIPLWPWLI ETLIRVLPIE VNAWDRFSIR QRHFIHDPVT
QPQRFGGSSH APDLATVLSD SGLPNRGTPR PARKVNAST