Gene Syncc9605_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1002 
Symbol 
ID3735753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp950550 
End bp951215 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID637775594 
Producthypothetical protein 
Protein accessionYP_381315 
Protein GI78212536 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5549] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.222918 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCG AGCTCTGTCC TCCACAACAG CAGGTTCGAA CGCTGCAGGT GGCTTTGGAG 
CAGCAGGCTT CTGGCCAGAG ACCCGGCTAT GCCTCCTCCA TCGCCACCAC CTCCCTGGGC
CCGCCCGTGT TGAAGCACTG GTGCGTCTGG GTTCAGCCCG CCGCCGCCAC GCCGGCCAAC
CGCTGGGACC AACGCTGGCT TGATCAGGTG TCCTCGGCGC TGACCACCTG GGGTGAACTG
GTTCCGTTCA CGCTGGTGGA CAGTCCGGAC CAAGCCAACG TGTTGATTCA CCGGCAGCGT
CCGGCTCGCC GGCAGGTGGC TGGAGTGTGG CGCGCTAGCA ACGGACGCAC ACAGCTTCAG
GCTGTGGATG TGCAGCGCCA GGGCCGCCGA AGGCTTGAAC CCCTGGTGAA GGTGATGGTG
TCACCAGGGC TGCGCGCTGA AGTACTGCAG GCCACAGCTC TGCATGAACT GGGTCATGCC
TTTGGCCTCT GGGGCCACAG TTCTGTTCCC ACTGATGTTC TGGCGATCAG CCAAGGCGAA
CATCCGGTCT TGGTGCCATC CCAGAGGGAT CGCTTCACGC TGGCGTGGGT GATGCAGCAG
CCCACCCGCT TCGGTTCGAC GATTCAACAG CCCAGCGATC CGGTCAAATC TGAATCACCG
GAGTGA
 
Protein sequence
MQPELCPPQQ QVRTLQVALE QQASGQRPGY ASSIATTSLG PPVLKHWCVW VQPAAATPAN 
RWDQRWLDQV SSALTTWGEL VPFTLVDSPD QANVLIHRQR PARRQVAGVW RASNGRTQLQ
AVDVQRQGRR RLEPLVKVMV SPGLRAEVLQ ATALHELGHA FGLWGHSSVP TDVLAISQGE
HPVLVPSQRD RFTLAWVMQQ PTRFGSTIQQ PSDPVKSESP E