Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1002 |
Symbol | |
ID | 3735753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 950550 |
End bp | 951215 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775594 |
Product | hypothetical protein |
Protein accession | YP_381315 |
Protein GI | 78212536 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5549] Predicted Zn-dependent protease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.222918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCG AGCTCTGTCC TCCACAACAG CAGGTTCGAA CGCTGCAGGT GGCTTTGGAG CAGCAGGCTT CTGGCCAGAG ACCCGGCTAT GCCTCCTCCA TCGCCACCAC CTCCCTGGGC CCGCCCGTGT TGAAGCACTG GTGCGTCTGG GTTCAGCCCG CCGCCGCCAC GCCGGCCAAC CGCTGGGACC AACGCTGGCT TGATCAGGTG TCCTCGGCGC TGACCACCTG GGGTGAACTG GTTCCGTTCA CGCTGGTGGA CAGTCCGGAC CAAGCCAACG TGTTGATTCA CCGGCAGCGT CCGGCTCGCC GGCAGGTGGC TGGAGTGTGG CGCGCTAGCA ACGGACGCAC ACAGCTTCAG GCTGTGGATG TGCAGCGCCA GGGCCGCCGA AGGCTTGAAC CCCTGGTGAA GGTGATGGTG TCACCAGGGC TGCGCGCTGA AGTACTGCAG GCCACAGCTC TGCATGAACT GGGTCATGCC TTTGGCCTCT GGGGCCACAG TTCTGTTCCC ACTGATGTTC TGGCGATCAG CCAAGGCGAA CATCCGGTCT TGGTGCCATC CCAGAGGGAT CGCTTCACGC TGGCGTGGGT GATGCAGCAG CCCACCCGCT TCGGTTCGAC GATTCAACAG CCCAGCGATC CGGTCAAATC TGAATCACCG GAGTGA
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Protein sequence | MQPELCPPQQ QVRTLQVALE QQASGQRPGY ASSIATTSLG PPVLKHWCVW VQPAAATPAN RWDQRWLDQV SSALTTWGEL VPFTLVDSPD QANVLIHRQR PARRQVAGVW RASNGRTQLQ AVDVQRQGRR RLEPLVKVMV SPGLRAEVLQ ATALHELGHA FGLWGHSSVP TDVLAISQGE HPVLVPSQRD RFTLAWVMQQ PTRFGSTIQQ PSDPVKSESP E
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