| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0936 |
|---|
| Symbol | |
|---|
| ID | 3737419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 900783 |
|---|
| End bp | 901289 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637775531 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_381253 |
|---|
| Protein GI | 78212474 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0566684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTGCA CGCTCATCTG TCTGGTCCGC ATGCTGTCTT GGCTTCTCTG CTCAGACGCA
CTGGCTCCAG AGTTTCAGAA GGTTTACCTC AAGTGGAAGT ACGTCACACC CAGCTCGATT
GTTCTGATCG CACCAACGAC AAAAGGTAAA ACCAAGACGC GAGCAATCCC ACTTCACCCG
TTGCTTGCCG AAGAGCTTGA TGCTTGGAAG CTTGTTGTCA ATCCAGATAA CAATCCAGAG
CAATGGGTAT TTCCAGGTCG TCATGCTTCA ACGCATCTGA CGCGACGTGG GTTTGACCAT
ACGCTGCGAC GGGCTGTCGA AGAACTTGGA TTGCAGGGAA CTTCAACTCA TGGCTTCAGA
CGCAGCTTCC TGACCAGTTG CAGTCAGAAC GGTGTGCCGC TGCGGAATAT CCAATCAATC
TCCGGACATT CCAATCTTCA GGTTTTGGCA AATTACATTG AAGTCTCTGA CTCCGATAAG
AGCGCTTGCG TTCTTGCCGG TGCATGA
|
|---|
| Protein sequence | MRCTLICLVR MLSWLLCSDA LAPEFQKVYL KWKYVTPSSI VLIAPTTKGK TKTRAIPLHP
LLAEELDAWK LVVNPDNNPE QWVFPGRHAS THLTRRGFDH TLRRAVEELG LQGTSTHGFR
RSFLTSCSQN GVPLRNIQSI SGHSNLQVLA NYIEVSDSDK SACVLAGA
|
|---|
| |