Gene Syncc9605_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0852 
Symbol 
ID3735919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp821210 
End bp822292 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content66% 
IMG OID637775449 
Producthypothetical protein 
Protein accessionYP_381175 
Protein GI78212396 
COG category[S] Function unknown 
COG ID[COG3367] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.98076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.809264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA TTCAGGCGCC GTCGGGATTT CGGGAGCTGC GGTTGGTGCT GCTCCAACAC 
GGCGGATTGG CCAGCCTCAC TGGCAAGACC GGTCTGGCCA TACTCCGCCA CCGTGCTGGT
CCGATCGTCG CGGTGATCGA TCCCGATCAT GCGGGCCAGT CTCTGCAATC CGTCACCGGT
ATCGAGCGTG ACGTGCCGGT GGTGGCGGAT TTGGCTGCGG CGCTGCCCTA CAAGCCTGAG
GTCGCTGTGG TCGGCCTGGC TCCCTCGGGG GGGCGGCTGC CTGATCCTGT CCGCCACGAT
GCCTTGGCGG CGTTGCGCGC CGGCCTTCAC CTCGCCAGCG GACTCCACAC CCGGCTGGCC
GATGATCCTG AGCTGGCGGA AGCCTGCTGG CCTGACCGTT GGATCTGGGA TCTTCGCCGG
GAGCCGGAAG GTCTCAACGT TGGCCAGGCA CGCGCCGCAG CACTCCCCTG TCGGCGGTTT
CTGGCGGTTG GCACCGATAT GGCTGTCGGC AAGATGAGTG CATGCCTGTC TTTGTTGGAG
GCGGCCCAGC GCTCCGGGAT CCCTGCGCGC TTTGTCGGGA CAGGTCAGGC GGGAATCCTG
ATCAGCGGGG AAGGGGTCGC CCTGGATGCT GTGCGCATTG ATTACGCCGC CGGTGCGGTG
GAGGCGGCGG TGCTTCGGGC CGCGGATGCT CTACCTGAGC AGGGCCTTGT GCTGGTGGAG
GGGCAGGGGT CGCTCTGCCA TCCGGCCTCA ACAGCCACCC TGCCCCTGTT GCGCGGCACC
CAGCCGACGG CTCTGTTGCT TGTGCATCGG GCAGCACAGC AGACCATCGA CCGGCTGCCT
CAGATTCCTC TCCCCAGCCT TGAGGCTTTG GTGGCCACCA CTGAAACCCT GGCAAGCTGG
GCTCGGCCTG ATGGGGCCGG TAAGCCAGCC AGGGTGGCCG CTGTCGCCCT CAACACCGCA
CGCCTTGATG AGGCTCAGGC TCGAGAGGAG GTGGAGCGCA TCTGCCAGAC CCTGGGTATG
CCCTGCACGG ATCCAATCCG CTGGGGTGCC GAACCTCTCC TGGAAACTTT GTTGAATTGT
TAG
 
Protein sequence
MSGIQAPSGF RELRLVLLQH GGLASLTGKT GLAILRHRAG PIVAVIDPDH AGQSLQSVTG 
IERDVPVVAD LAAALPYKPE VAVVGLAPSG GRLPDPVRHD ALAALRAGLH LASGLHTRLA
DDPELAEACW PDRWIWDLRR EPEGLNVGQA RAAALPCRRF LAVGTDMAVG KMSACLSLLE
AAQRSGIPAR FVGTGQAGIL ISGEGVALDA VRIDYAAGAV EAAVLRAADA LPEQGLVLVE
GQGSLCHPAS TATLPLLRGT QPTALLLVHR AAQQTIDRLP QIPLPSLEAL VATTETLASW
ARPDGAGKPA RVAAVALNTA RLDEAQAREE VERICQTLGM PCTDPIRWGA EPLLETLLNC