| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0620 |
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| Symbol | ispD |
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| ID | 3737072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 599716 |
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| End bp | 600357 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637775219 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_380949 |
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| Protein GI | 78212170 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGG ATCGCAACAA GCTGCTGCTG CCGTTGGCCG GACGCCCCGT CATTGCCTGG
ACCATTGAGG CGGCCCTGCG GTCTGAGCGG ATTGAATGGA TCGGGATCGT TGGCCAGGAG
GTTGATCGAG AGGCCATCCT TGCGGTGCTG GATGAGCCCA GCAAGCCGGT GCACTGGATC
CAGGGCGGCA GCACGCGGCA GGAGTCGGTT CTGTGTGGTC TGGCCGGGTT GCCTGAGCAG
GCTCGCCACG TCTTGATTCA TGACGGCGCC CGTTGTCTGG CTGAACCGAA GTTGTTTGAT
CGCTGTGCAG CTGTGGTGGA GGACGGCACG GCGCTGATTG CTGCAACGCC GGTGAGCGAC
ACGATCAAGC GTGTGGGATC CGACGGTGTG ATTCGCGATA CGCCGGATCG ATCGGAGCTC
TGGGCGGCGC AGACGCCGCA GGGCTTTGCT GTTGATCAGC TGCGTCGCGG CCACGCTGAG
GCGGTTGCCC AGGGCTGGAC GGTCACCGAC GATGCGTCGT TGTATGAGCG TCTGGGTTGG
CCTGTGCAGG TCTTGGATGC CGGCCCGGCC AACATCAAGG TCACCACACC GTTTGACCTC
ACCGTTGCGG AAGCGGTTCT CGCCCTCAGG TCAGCAGGCT GA
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| Protein sequence | MGADRNKLLL PLAGRPVIAW TIEAALRSER IEWIGIVGQE VDREAILAVL DEPSKPVHWI
QGGSTRQESV LCGLAGLPEQ ARHVLIHDGA RCLAEPKLFD RCAAVVEDGT ALIAATPVSD
TIKRVGSDGV IRDTPDRSEL WAAQTPQGFA VDQLRRGHAE AVAQGWTVTD DASLYERLGW
PVQVLDAGPA NIKVTTPFDL TVAEAVLALR SAG
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