Gene Syncc9605_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0601 
Symbol 
ID3737590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp582743 
End bp583756 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content66% 
IMG OID637775200 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_380930 
Protein GI78212151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.304363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCT GGAGTGAGCG GTTGGGTCCC CTGAGCCGGC GCCATGTGCT CCAGATGATC 
GGGGCGACGG GTACCGCGCT GCTGGCGGGC TGTCGTCCGA CGACTTCCGC CCCAACCCTG
ATGGCTCCGG CTGGGGTTTT GCCGAAACCG TGGGCTGATG CCTTGCCCAA GCCCTGGCGC
CTAACACTGG CTCCAGCCCA GCAGGATTGG ACGCCGGCGG ATCAGGCGCG TGCCGATGTT
TTGGTGATTG GTGATGGATG GCTCGATTCC CATCCAGCGG ACACGCTCCA GCCCATTGCC
TCTGAACCGC TCGTCAGCCA GTTGGATGGT CAGGCCAAGG CTCTGCTGGC CAGCCTCGGT
GCCCTGCAGG ATCGGGTGTT GCCGCTGGCC GTCAGCCCCT GGGTGATGCT GTTGCGGGAT
GACCCGGCCA TGACCCAGCA GGGGTGGCCC CTGTTGCTGG ATTCCTCCTT GGCAGGGCGT
GTGGTGCTTC CTGCCAGCCC ACGCCTGGTC ATGAGCCTGG CGGACCATTT GGGCGGAGGC
CAGGCTTTGC CTGCGTTGCG TCGCCAGGCC CTCACCTATG ACGATCGTCA AGTCACCAAC
TGGCTGCTCA AGGGTGAGGC CAAGGTGGTG GTGCTTCCGC TGAGCCGCTG TATCGCTTTG
TTGGGGCGGG ACCCCCGTCT TCGGGCGATC CTGCCTGCCT CCGGTGCCCC CTTGCACTGG
ACTGTTCTGC TCAGGCCAGA GGCCAGTCGT GAACCGGTTC CCCAGAGCTG GGTTGAGCAG
GGATGGCGGG ATCCCCTGCG TCGCCGCTTG GTGCAGCAGG GATGGCGGGC GCCGATTGCA
TCGTCAGGGG CGATCGTGGA TCAGAACGCC CTTTCGGCGC GCCTGCGGCC TCTGCTCTTT
CCGTCCGCAG ACACCTGGTT GCGTTGCTGG TCGCTGCCCC CGCTGTTGCC CGAAGACCGG
AGTGGATTGG AAGAGCGCTG GCGTGATTCA GCTCCAGAGC CGCCGTCGCG GTGA
 
Protein sequence
MNLWSERLGP LSRRHVLQMI GATGTALLAG CRPTTSAPTL MAPAGVLPKP WADALPKPWR 
LTLAPAQQDW TPADQARADV LVIGDGWLDS HPADTLQPIA SEPLVSQLDG QAKALLASLG
ALQDRVLPLA VSPWVMLLRD DPAMTQQGWP LLLDSSLAGR VVLPASPRLV MSLADHLGGG
QALPALRRQA LTYDDRQVTN WLLKGEAKVV VLPLSRCIAL LGRDPRLRAI LPASGAPLHW
TVLLRPEASR EPVPQSWVEQ GWRDPLRRRL VQQGWRAPIA SSGAIVDQNA LSARLRPLLF
PSADTWLRCW SLPPLLPEDR SGLEERWRDS APEPPSR