Gene Syncc9605_0558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0558 
Symbol 
ID3737660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp541216 
End bp542016 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content54% 
IMG OID637775156 
Producthypothetical protein 
Protein accessionYP_380887 
Protein GI78212108 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00776126 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.438899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTC TTGGCTTTCT GTTGGCAGCC CTGGCGGTTG CCTTTGTTAT CGCCAAAGTG 
CTTTTCAAGC AGCAGGCTGG TCCCTCTCCG AATAACTCAC GAGCTGTAAG CCATTCAGCA
GTAAATGAAG CCGAATCTTG GGTTGAAAAG GACGCAGAGT CCCTGCTCGA TGGGATCCCG
CTCAAGGGGA TGGTCTTTCA TGCAACCTTC AAGCTCACTA CTCCCTTGGC GGTATTGGAG
CAGCACGGTT TGCTCGTCCC GCAAGGTGAG CCATTGCCAA AGGTGATGCC CGGTGCTGGC
AGCTCAGAGG ATCCTTTCGG CGCCTATGGG ATGTGGTTCC ACGAAATCGA CTACGAAGCA
CAGGGTTTCA TTCCTCCAGC GCCTTCGCTG ATTTGGACGC AGCTTGGTCA TTACAGGGAA
AACGATCCTG AATACGCAGA GCTCCTGGAA TTTTTGAAGG GGTTTCGGCG CATTGTCGAA
AGCACCGATG ACGTCATGGA GGCCCTTGAT CATCTTCAAG ACTTCTCACG TCAGTCGCAG
TCTCATCAAC GCGTCTGGGA GAGGTACACA GACCTGTTCC CCGAGTTCCC CATGCACTAT
TTCGCTGAGC AACTTCGCTT CAACATTGGT GGCTCGAAAA AACATGCCAG GTGTCTTATC
GACGCTGGCT ACACCAGCCC CCAAAAGGTC AGGGATGCTT CCGATGCAGA GTTGCTGCAG
GTCAAAGGCA TCGGGTCGAT CACTGTGAAG CGGATCCGAG AGAGGCTTGC CAATCCAGGC
GAGCGCTTCG ATATGGACTG A
 
Protein sequence
MELLGFLLAA LAVAFVIAKV LFKQQAGPSP NNSRAVSHSA VNEAESWVEK DAESLLDGIP 
LKGMVFHATF KLTTPLAVLE QHGLLVPQGE PLPKVMPGAG SSEDPFGAYG MWFHEIDYEA
QGFIPPAPSL IWTQLGHYRE NDPEYAELLE FLKGFRRIVE STDDVMEALD HLQDFSRQSQ
SHQRVWERYT DLFPEFPMHY FAEQLRFNIG GSKKHARCLI DAGYTSPQKV RDASDAELLQ
VKGIGSITVK RIRERLANPG ERFDMD