Gene Syncc9605_0555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0555 
Symbol 
ID3737657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp538656 
End bp539633 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content40% 
IMG OID637775153 
Producthypothetical protein 
Protein accessionYP_380884 
Protein GI78212105 
COG category[S] Function unknown 
COG ID[COG5361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.311779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0765605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAAGCA CCTCAAACAA GGTTAGTGTC GACAAATCCA ATTATGCAAA AGCAGAAACA 
ACGGATGTTT TAAAAGATTA CATAAAGAAA ATATCAAAGG GCACATGCAC TACAGGGGTG
GGAGTGTTCA TGCATCAGAG ATCTGCTATG GATCCTGCAG ATAGGACAAT ATTAAGACCC
AATTTTGACA CTCTTTATTC ATTTGCAGTG CTAGACCTTA AAAATCCTGC AACAATTAAT
TTACCCGAAA TCACTCGATA CCAAATACTA GAAATTGTTA CTGGTGAGCA CTGGATACCC
CTTGTTAGTG ACAAGCCTGG CACTTATCAG ATAACCCAAG AGCTGACAGG AAGTAGATAT
GCTTTCGCGA TGGTAAGAAC ACAGGTCAAC ATGCAGGATG AAAACGATCT CAAAAATGCT
AGAGAAGCTC AAGATAAATT AGAACTAGTT CAGGCTTCTC AAGGAGTTTA TGAGCAAGAC
AAAGAATTCA ATAGGAGTGA AATACTGTCA CTTCGAGCTG AATATAATCA AAGAAGACAG
CCCGAGGGCA TAACATCCGA AATGATTTTT GGAAAGGAAG GAGAAATTAG CCCTGAAATG
CGGAACTTTG GAGTCGCTAT TGGCTGGGGG GGACTTCCAA AGCAAGGGGC CGTATATCCA
ATGCCAAAAC TTACAGAATC GACCGATCCA CAAAGGCTAA TCATGAAAAA TGTGCCTATG
GAGAAAGGTT CTTTTTGGTC CGTCACCGTT TATGATGAAA ACGGTTTTTC TACGGGTAAG
TATTACAATA TTAACAGCGC ATTTGCGAAG GAAAGCAACC CCGGCGAATA CATAATCAAT
CTTGGCGGAT CCGAAAATGA AGATAATTTC TTGAATATAT TCCCAGGGTG GAATGCCGTA
ATCCGAATCT ATTCACCTAC TAAAGACTAT TTCAATGGTT CTTGGGAAGT CCCTCAGTAT
GAGCCTAAAA ATCAATAA
 
Protein sequence
MSSTSNKVSV DKSNYAKAET TDVLKDYIKK ISKGTCTTGV GVFMHQRSAM DPADRTILRP 
NFDTLYSFAV LDLKNPATIN LPEITRYQIL EIVTGEHWIP LVSDKPGTYQ ITQELTGSRY
AFAMVRTQVN MQDENDLKNA REAQDKLELV QASQGVYEQD KEFNRSEILS LRAEYNQRRQ
PEGITSEMIF GKEGEISPEM RNFGVAIGWG GLPKQGAVYP MPKLTESTDP QRLIMKNVPM
EKGSFWSVTV YDENGFSTGK YYNINSAFAK ESNPGEYIIN LGGSENEDNF LNIFPGWNAV
IRIYSPTKDY FNGSWEVPQY EPKNQ