Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0496 |
Symbol | |
ID | 3735322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 485413 |
End bp | 486426 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637775092 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_380825 |
Protein GI | 78212046 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0756826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGTA CCGCTCTTGC CGCCCTGCTG CTGACGGCCT GGTTCCCCCT TTCAGCCATG GCTGCCTCGG TCACGGTGCG GTCCGGCGAA ACACTTTCAG ATATCGCTAA CCGATACGGG GTGAGCGTTG GCATGTTGAT GCGGATGAAT GGGATCCGCA ATCCAGACCT TGTGCAAGCC GGGAGCCGCC TGCGGGTGCC AGGCCCCACC GTGACTGCAG GCCCGGGCCG CCATCGCGTC AACAGCGGTG AAACCCTCAG CAGCATTGCC AACCGATACC AGGTCCGCAG TCGCGACCTC ATGGCCCTCA ACAACCTGCG CAATGCCAAC CACGTTGAGG TCGGCCAGAC CCTGCGACTT CCGAGCAATG CCGTGATGCC CCGTCCGGCC TTTAAGCCGG TGGCTGTGAC CCCGATCCCT GGAGCCACGG AACACACCGT TGCCAAAGGG CAGACCCTCA CGCAGATCGC CAAGGCCTAC AAGCTGCCGG TGGCCAGCCT GATCAGCATC AACCAGCTGA TTGACCCCAA CAAAGTGGAG GTGGGCACGC GCCTCTACCT GACCGATCCC TCCCTCCAGA AACCCATCAC CACCCAGGTG CAGCCGGCAA CAACGAAACC GGTTCAAGCC AAGGCCGAGC CCGTGCAAAC CAAGGCCGTG CAAACCAAGG CCGTGCAAAC CAAGAAAGTG CAAACGAAAC CGGTTCAGGC CAAAAAACCG GTGGTCAAGG CCAAGCCGGT CGAGGCCGCC AAGCCCAAGC AGACCCTGGC CAAATCGGCT GACTGGCGCA CCTATGGCCC GCTCCAGGTG GACTGGGGCA ACTGGCAAGC CATGGGTGGC AGTCAAGTGG TCCCCACCCT CAATGCCCAG GGGCAGGCCC TTTATCTGGC TGTGAACTGT TCCGCCAAGA AGATCAATGC CACCGGTGCC AATGGGAGCT GGAAAACCTG GGAAGCACCG AAGAGCCGCT TCGAAAAAGA CCTGGTGAAG GACCGCTGTC AGCTCAAGGC CTGA
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Protein sequence | MRRTALAALL LTAWFPLSAM AASVTVRSGE TLSDIANRYG VSVGMLMRMN GIRNPDLVQA GSRLRVPGPT VTAGPGRHRV NSGETLSSIA NRYQVRSRDL MALNNLRNAN HVEVGQTLRL PSNAVMPRPA FKPVAVTPIP GATEHTVAKG QTLTQIAKAY KLPVASLISI NQLIDPNKVE VGTRLYLTDP SLQKPITTQV QPATTKPVQA KAEPVQTKAV QTKAVQTKKV QTKPVQAKKP VVKAKPVEAA KPKQTLAKSA DWRTYGPLQV DWGNWQAMGG SQVVPTLNAQ GQALYLAVNC SAKKINATGA NGSWKTWEAP KSRFEKDLVK DRCQLKA
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