Gene Syncc9605_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0415 
Symbol 
ID3736512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp414517 
End bp415056 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content60% 
IMG OID637775005 
Productrare lipoprotein A 
Protein accessionYP_380746 
Protein GI78211967 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.382353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.149224 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTCC TTCTGACGCT GGCCACGCTC TCTGGAGCGA TTTCAGGCAG TGCAGCCCTC 
CTGCCTGTCG TGGCGTGTGA TTTCCTCTCG GTCAACGGTG CAGAGCCGCT TGACCCTCTG
GATCTGGTGG TCGAGCCCCA AGCCCCTGAG CTGCAAGCAA CCCTTCCTTC TGCGGAGGTC
AAACCGGTCC TTGCACCTCC TTCCTCTGAG CTCCCCAAGC CGAAGCTGAA GGTTGTACCG
GAGGTGGTGA AAGTCATCAC TGGTGAAGCC AGTTGGTATG GCCCCGGTTT TTATGGCAAC
CGCACCGCCA ATGGTGAGGT TTACAGACGC GGCACGATGA CGGCAGCCCA CCGTGCGCTT
CCTTTTGGTA CGAAAGTGCG CGTCACCAAC CTCTGGAACG GGCGCACGGC CGTAATCCGC
ATCAACGATC GCGGACCTTT CATCGATCAC CGGGTGATCG ACCTTGGCCA CGGTGCCGCC
TCTGATCTGG GGTTGACCGC CTCTGGAATC GCCCAAGTCA AGCTTGAGGT GCTGCGCTGA
 
Protein sequence
MRVLLTLATL SGAISGSAAL LPVVACDFLS VNGAEPLDPL DLVVEPQAPE LQATLPSAEV 
KPVLAPPSSE LPKPKLKVVP EVVKVITGEA SWYGPGFYGN RTANGEVYRR GTMTAAHRAL
PFGTKVRVTN LWNGRTAVIR INDRGPFIDH RVIDLGHGAA SDLGLTASGI AQVKLEVLR