Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0415 |
Symbol | |
ID | 3736512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 414517 |
End bp | 415056 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637775005 |
Product | rare lipoprotein A |
Protein accession | YP_380746 |
Protein GI | 78211967 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.382353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.149224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTCC TTCTGACGCT GGCCACGCTC TCTGGAGCGA TTTCAGGCAG TGCAGCCCTC CTGCCTGTCG TGGCGTGTGA TTTCCTCTCG GTCAACGGTG CAGAGCCGCT TGACCCTCTG GATCTGGTGG TCGAGCCCCA AGCCCCTGAG CTGCAAGCAA CCCTTCCTTC TGCGGAGGTC AAACCGGTCC TTGCACCTCC TTCCTCTGAG CTCCCCAAGC CGAAGCTGAA GGTTGTACCG GAGGTGGTGA AAGTCATCAC TGGTGAAGCC AGTTGGTATG GCCCCGGTTT TTATGGCAAC CGCACCGCCA ATGGTGAGGT TTACAGACGC GGCACGATGA CGGCAGCCCA CCGTGCGCTT CCTTTTGGTA CGAAAGTGCG CGTCACCAAC CTCTGGAACG GGCGCACGGC CGTAATCCGC ATCAACGATC GCGGACCTTT CATCGATCAC CGGGTGATCG ACCTTGGCCA CGGTGCCGCC TCTGATCTGG GGTTGACCGC CTCTGGAATC GCCCAAGTCA AGCTTGAGGT GCTGCGCTGA
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Protein sequence | MRVLLTLATL SGAISGSAAL LPVVACDFLS VNGAEPLDPL DLVVEPQAPE LQATLPSAEV KPVLAPPSSE LPKPKLKVVP EVVKVITGEA SWYGPGFYGN RTANGEVYRR GTMTAAHRAL PFGTKVRVTN LWNGRTAVIR INDRGPFIDH RVIDLGHGAA SDLGLTASGI AQVKLEVLR
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