Gene Swoo_4905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4905 
Symbol 
ID6119286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5898863 
End bp5899246 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content44% 
IMG OID641636490 
ProductATP synthase I chain 
Protein accessionYP_001763249 
Protein GI170729223 
COG category[C] Energy production and conversion 
COG ID[COG3312] F0F1-type ATP synthase, subunit I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000915146 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.14779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAAGG TTTTAGCACG CCGTGGCCGA TGGTCAGCCT ATAAATTGGT ATTGATGCAG 
GCGGCGGTTG CTGGGGGTGC TTCTATTTTC TTTTTCGCCA CGTGGGGAGC TCAGTATGGT
TTATCTGCAT TAGCAGGTGG CGCCATTGCT GTACTCCCTA ATTTTGTATT CGCAACCCTC
GCTTTTTCCC ACACGGGAGC AAGTTCAGCT GGAAAGGTCG TTAAGACTTT TTACTGGGGG
GAAGCGGTAA AGTTGCTGCT TACAATAGCA ATGTTTTCAC TAGTGTTTAT CAATATGGAA
ATTGGTTTTA TGCCACTTTT TGTTTGTTAT ACCTTAGCGT TAATCGTGCA TTGGACAGCT
CCTTTATATT TCAAGCAAAG TTAA
 
Protein sequence
MSKVLARRGR WSAYKLVLMQ AAVAGGASIF FFATWGAQYG LSALAGGAIA VLPNFVFATL 
AFSHTGASSA GKVVKTFYWG EAVKLLLTIA MFSLVFINME IGFMPLFVCY TLALIVHWTA
PLYFKQS