| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4897 |
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| Symbol | atpC |
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| ID | 6119278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5892303 |
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| End bp | 5892731 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636482 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001763241 |
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| Protein GI | 170729215 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.271639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGCCA TGACAGTACA ACTTGATATT GTTAGTGCAG AAAATAGCAT CTTTTCTGGT
CTTGTAGCAC ACCTACAAGT AACTGGTTCA GAAGGTGATC TGGGTGTTAT GCCTGGTCAC
GCGCCACTGC TGACAAATAT CAAACCTGGC ATGGCACGCA TCGTCAAGCA AGATGGGAAA
GAAGAGGTGT TTTATCTTTC GGGCGGAATC CTGGAAGTTC AACCTTCATC TGTTTCAGTA
TTGGCTGACG TAGTTAAGCG TGCCGATGAA ATTGACGAAA AAGCAGCTGA AGAAGCTAAG
CGTCGTGCAG AGTCTGCTAT GGCAGATGCT GGCGCTGACT TCAACTATGC TGCCGCAGCA
AATGAGTTAG CTCAGGCTGT TGCTCAGTTG CGTGTTGTTG ATACCATCAA AAAGAACATT
GCCAGATAA
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| Protein sequence | MAAMTVQLDI VSAENSIFSG LVAHLQVTGS EGDLGVMPGH APLLTNIKPG MARIVKQDGK
EEVFYLSGGI LEVQPSSVSV LADVVKRADE IDEKAAEEAK RRAESAMADA GADFNYAAAA
NELAQAVAQL RVVDTIKKNI AR
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