| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4893 |
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| Symbol | |
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| ID | 6119274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5886238 |
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| End bp | 5887008 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641636478 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001763237 |
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| Protein GI | 170729211 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.239282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAAC GTAATACCCA GCAGCGCCGA CATAGCATTA TCAGCATCCT AAATGAACAG
GGTGAGGTCA GTGTTGATGA GTTATCTACT CGTTTCGAAA CATCTGAGGT CACTATTCGT
AAAGACCTAG CTGCACTAGA GAAAACAGGT CTCTTGTTAC GTCGTTATGG TGGCGCGGTT
GCTATCCCTG ATGAGGTGAC ACAGCAGTTT ACTGCCAAGA TAGCACCCAA TAAGTTATCG
ATTGCCGAAA CTGCGGCAGA ACTTATCAAT GATCATAATC GCATCATTAT CGACAGCGGC
AGTACGACAT CTGGGCTTAT TCAGCAGTTA AACAGTAAGC GTGGTCTGCT TGTGATGACC
AACTCTCTGC AGTTGGCCAA TGCGATACAT GAGCTGGAAA ATGAGCCAAC TCTGTTGATG
ACAGGTGGTA CTTGGGATCC CCATTCTGAA TCTTTTCAGG GACAGGTTGC CGAGCAAGTA
TTGCGTTCAT ATAACTTTGA TCAGCTTTTT ATCGGTGCCG ACGGTATCGA TCTCGAGCGC
GGCACTACTA CCTTCAATGA GTTAACTGGT CTTAGTAAGG TGATGGCAGA AGTATCACGG
GAAGTCATTG TGATGCTTGA GTCCGACAAG GTTGGGCGAC GTATCCCTAA TTTAGAGCTG
CCATGGAGCA AGGTGAGCGT GCTTGTTACC GATGACAGAC TTGCCGCAGA AGCGGTTGAA
AGTATTACTA ACCATGGTGT GCGGGTCATA CTTGCACGCC ATGTAAGTTA A
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| Protein sequence | MNKRNTQQRR HSIISILNEQ GEVSVDELST RFETSEVTIR KDLAALEKTG LLLRRYGGAV
AIPDEVTQQF TAKIAPNKLS IAETAAELIN DHNRIIIDSG STTSGLIQQL NSKRGLLVMT
NSLQLANAIH ELENEPTLLM TGGTWDPHSE SFQGQVAEQV LRSYNFDQLF IGADGIDLER
GTTTFNELTG LSKVMAEVSR EVIVMLESDK VGRRIPNLEL PWSKVSVLVT DDRLAAEAVE
SITNHGVRVI LARHVS
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