| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4890 |
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| Symbol | |
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| ID | 6119271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5881354 |
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| End bp | 5882655 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641636475 |
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| Product | serine transporter |
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| Protein accession | YP_001763234 |
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| Protein GI | 170729208 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAA GTATTGCGAC AGTAGAGATA TCCCGCGACA CCTCAACGGC TGCGGAATGG
AAAGAAGCGA CTCGATTTGA CAGTACCGAT TGGGGCTGGA TTGTAATGAG TATAGGTATG
GCCATAGGTG CAGGTATCGT TTTCTTACCT ATACAAGTTG GCGTAATGGG TCTTTGGGTA
TTTTTACTCT CCTCCATTAT TGGCTACCCA GCCATGTACC TATTTCAAAA ACTGTTTATT
AATACATTAG CTGAATCTAA AAAGTGTACC GATTATCCTG GTGTAATTTC AGGTTATCTT
GGTAAAAACT GGGGAGTTGC ATTAGGGGTA CTCTACTTCT TAATGTTAGT GATCTGGGTG
CTGGTTTACT CACTCGCAGT CACCAATGAC AGCGCCTCCT ATCTCCACTC ATTCGGCGTT
ACCGAAGGAG ATCTAAGTGA TAATGTTTTC TACGGTTTAG GCCTTATCTG CGTACTAGTT
TTCATCGGCT CTAAAGGCGA AAAGCTGCTG TTTAAACTGT CAGGCTTTAT GGCTGTAACA
GTTCTCTGTC TCGTTGGCGT GATGGGTGTA CTTCTGATCG CTCGTTGGGA TATCAACAAT
ATTCCTGAGA TGGGCCAATT TGGCTCTATG ATGAAAGATG CGATTATCAC CTTGCCATTT
ACCCTAACCT CAATTCTCTT TATTCAATCA TTGAGCCCTA TGGTTATCTC ATACCGAGCC
CATGAAAAAT CAATTGAGGT GGCACGCTAT AAATCAACAC GTGCAATGAC AATAGCCTTC
TCTCTCCTCT TCGTTATTGT GTTCTTCTTC GCGGTATCGT TCACCTTTGC CATTAGCCAA
GAACAAGCCA CAGAAGCGAT GAATAAGAAC ATCTCTGCTC TTGCTATTAT TGCGCATTAC
TTTCCAGGGA GCTGGGCAAC GATTACAGGT GTGGTGATTA ATATCTTCGC CATTGTGACC
TCATTCTTTG GTGTATTCCT CGCATTCAAG GAAGCCTGTA AAGGTTTGGC GATGAATCTA
CTGCTACGTA AATTCAAAGA GTCTCAAGTA AATAAGGCGA AAGTAGATAA GCTAGTTACT
GTCTTTATTA TCTTACTCGC ATGGTCAGCT ATCGCACTTA ATGCGCCTAT CTTGTCATTT
ACTTCAATCT GCAGCCCTAT CTTTGGTCTG GTTGGTTGTT TAATCCCAGC TTACCTAGTG
TATAAAGTGC CACAGTTAAA CAAGTATAAA GGTCCAGCAA CTAACTTCAT CATTATCACT
GGTGTACTCC TTTGTATATC TCCCTTTATT GCATTTAGCT AA
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| Protein sequence | MTASIATVEI SRDTSTAAEW KEATRFDSTD WGWIVMSIGM AIGAGIVFLP IQVGVMGLWV
FLLSSIIGYP AMYLFQKLFI NTLAESKKCT DYPGVISGYL GKNWGVALGV LYFLMLVIWV
LVYSLAVTND SASYLHSFGV TEGDLSDNVF YGLGLICVLV FIGSKGEKLL FKLSGFMAVT
VLCLVGVMGV LLIARWDINN IPEMGQFGSM MKDAIITLPF TLTSILFIQS LSPMVISYRA
HEKSIEVARY KSTRAMTIAF SLLFVIVFFF AVSFTFAISQ EQATEAMNKN ISALAIIAHY
FPGSWATITG VVINIFAIVT SFFGVFLAFK EACKGLAMNL LLRKFKESQV NKAKVDKLVT
VFIILLAWSA IALNAPILSF TSICSPIFGL VGCLIPAYLV YKVPQLNKYK GPATNFIIIT
GVLLCISPFI AFS
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